RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 SPPL3Q8TCT6 385 aa17.7■□□□□ 0.42
LITAF-210ENST00000571976 ACCSQ96QU6 501 aa17.7■□□□□ 0.42
LITAF-210ENST00000571976 TMEM175Q9BSA9 504 aa17.7■□□□□ 0.42
LITAF-210ENST00000571976 GBP3Q9H0R5 595 aa17.7■□□□□ 0.42
LITAF-210ENST00000571976 TOPORSQ9NS56 1045 aaPredicted RBP17.7■□□□□ 0.42
LITAF-210ENST00000571976 MIOSQ9NXC5 875 aa17.7■□□□□ 0.42
LITAF-210ENST00000571976 SPG21Q9NZD8 308 aa17.7■□□□□ 0.42
LITAF-210ENST00000571976 EXOC7Q9UPT5 735 aa17.7■□□□□ 0.42
LITAF-210ENST00000571976 GDAQ9Y2T3 454 aa17.7■□□□□ 0.42
LITAF-210ENST00000571976 COL4A4P53420 1690 aaPredicted RBP17.7■□□□□ 0.42
LITAF-210ENST00000571976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.69■□□□□ 0.42
LITAF-210ENST00000571976 ZNF202O95125 648 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 ALDH2P05091 517 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 GALTP07902 379 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 HARSP12081 509 aaKnown RBP17.69■□□□□ 0.42
LITAF-210ENST00000571976 CASP1P29466 404 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 PBX3P40426 434 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 SCNN1GP51170 649 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 YARSP54577 528 aaKnown RBP17.69■□□□□ 0.42
LITAF-210ENST00000571976 KRT17Q04695 432 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 GRIK3Q13003 919 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 CUL4BQ13620 913 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 KYAT1Q16773 422 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 L1TD1Q5T7N2 865 aaKnown RBP17.69■□□□□ 0.42
LITAF-210ENST00000571976 KRBA2Q6ZNG9 492 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 GRAMD1CQ8IYS0 662 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 SLC39A11Q8N1S5 342 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 CEP120Q8N960 986 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 POF1BQ8WVV4 589 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 CCDC34Q96HJ3 373 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 ACAP3Q96P50 834 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 IPO9Q96P70 1041 aaKnown RBP17.69■□□□□ 0.42
LITAF-210ENST00000571976 TSHZ2Q9NRE2 1034 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 DNAJB4Q9UDY4 337 aa17.69■□□□□ 0.42
LITAF-210ENST00000571976 PUF60Q9UHX1 559 aaKnown RBP17.69■□□□□ 0.42
LITAF-210ENST00000571976 NR1I2O75469 434 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 MYBP10242 640 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 CASP5P51878 434 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 OSTNP61366 133 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 EHHADHQ08426 723 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 DSC1Q08554 894 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 FAM26FQ5R3K3 315 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 SLFN12LQ6IEE8 588 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 KANK3Q6NY19 840 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 HAPLN2Q9GZV7 340 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 TMEM206Q9H813 350 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 LZTS1Q9Y250 596 aa17.68■□□□□ 0.42
LITAF-210ENST00000571976 A0A0B4J269 797 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 NT5C1B-RDH14C9J2C7 533 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 B4GALT3O60512 393 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 THP07101 528 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 CLTAP09496 248 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 SLC11A1P49279 550 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 KCNA1Q09470 495 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 SLC39A4Q6P5W5 647 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 ALKAL1Q6UXT8 129 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 COLGALT2Q8IYK4 626 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 SYCP3Q8IZU3 236 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 FMR1NBQ8N0W7 255 aaPredicted RBP17.67■□□□□ 0.42
LITAF-210ENST00000571976 MICALL1Q8N3F8 863 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 HPS3Q969F9 1004 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 TMEM169Q96HH4 297 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 FGFBP2Q9BYJ0 223 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 FAN1Q9Y2M0 1017 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 STYXL1Q9Y6J8 313 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 COL6A3P12111 3177 aa17.67■□□□□ 0.42
LITAF-210ENST00000571976 ANKRD63C9JTQ0 380 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 PTGESO14684 152 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 NRP1O14786 923 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 OGTO15294 1046 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 EIF3DO15371 548 aaKnown RBP eCLIP17.66■□□□□ 0.42
LITAF-210ENST00000571976 DNAJB1P25685 340 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 OR1G1P47890 313 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 FAM160A1Q05DH4 1040 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 TUSC3Q13454 348 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 CAMK1Q14012 370 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 POSTNQ15063 836 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 CCDC85BQ15834 202 aaPredicted RBP17.66■□□□□ 0.42
LITAF-210ENST00000571976 TIGD5Q53EQ6 642 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 XKR4Q5GH76 650 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 PPM1EQ8WY54 764 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 IGSF21Q96ID5 467 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 MSTO1Q9BUK6 570 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 TLR9Q9NR96 1032 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 STK39Q9UEW8 545 aa17.66■□□□□ 0.42
LITAF-210ENST00000571976 KLRC4O43908 158 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 PRPF6O94906 941 aaKnown RBP17.65■□□□□ 0.42
LITAF-210ENST00000571976 PSMD2Q13200 908 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 SEZ6Q53EL9 994 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 PDE12Q6L8Q7 609 aaKnown RBP17.65■□□□□ 0.42
LITAF-210ENST00000571976 EPM2AIP1Q7L775 607 aaPredicted RBP17.65■□□□□ 0.42
LITAF-210ENST00000571976 TMEM87AQ8NBN3 555 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 GLIS3Q8NEA6 775 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 ENGASEQ8NFI3 743 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 ZNF507Q8TCN5 953 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 SNX27Q96L92 541 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 COLEC11Q9BWP8 271 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 CXCL16Q9H2A7 254 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 NSUN3Q9H649 340 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms