RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 BRD1O95696 1058 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 EFEMP2O95967 443 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 OSTNP61366 133 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 NAB2Q15742 525 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 HAUS6Q7Z4H7 955 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 EFHBQ8N7U6 833 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 MRPL43Q8N983 215 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 FEZF2Q8TBJ5 459 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 RSPH1Q8WYR4 309 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 DDX12PQ92771 950 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 DNAJC19Q96DA6 116 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 MSLNLQ96KJ4 702 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 MRPL4Q9BYD3 311 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 STK17AQ9UEE5 414 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 ODF2LQ9ULJ1 636 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 BARX2Q9UMQ3 279 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 CITO14578 2027 aa11.24□□□□□ -0.61
GTF3C1-213ENST00000571886 GRXCR2A6NFK2 248 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 CASTOR2A6NHX0 329 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 TRAK2O60296 914 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 CUTAO60888 179 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 LILRB3O75022 631 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 CLASP2O75122 1294 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 CTSAP10619 480 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 HARSP12081 509 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 GRM5P41594 1212 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 SMTNP53814 917 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 GRIK3Q13003 919 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 AAK1Q2M2I8 961 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 DCAF4L1Q3SXM0 396 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 ZNF568Q3ZCX4 644 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 ZC2HC1CQ53FD0 456 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 GLRA4Q5JXX5 417 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 PTCRAQ6ISU1 281 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 PDE12Q6L8Q7 609 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 ALKAL1Q6UXT8 129 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 SV2BQ7L1I2 683 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 SFR1Q86XK3 245 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 HACE1Q8IYU2 909 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 RNF168Q8IYW5 571 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 FGFBP2Q9BYJ0 223 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 GPR62Q9BZJ7 368 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 PARVGQ9HBI0 331 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 NGRNQ9NPE2 291 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 CD320Q9NPF0 282 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 LARSQ9P2J5 1176 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 RCOR1Q9UKL0 485 aa11.23□□□□□ -0.61
GTF3C1-213ENST00000571886 TISP43B9A030 160 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 ANKRD63C9JTQ0 380 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 K7ENM7 598 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 MBTPS2O43462 519 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 NCK2O43639 380 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 THP07101 528 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 PDIA4P13667 645 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 CA8P35219 290 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 TXLNAP40222 546 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 STAT6P42226 847 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 NDUFV1P49821 464 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 SOX4Q06945 474 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 STRN3Q13033 797 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 SMC1AQ14683 1233 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 PDCD11Q14690 1871 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 E2F4Q16254 413 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 ZBTB41Q5SVQ8 909 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 LLGL2Q6P1M3 1020 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 SLC39A4Q6P5W5 647 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 MPZL3Q6UWV2 235 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 CD300LGQ6UXG3 332 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 CCDC73Q6ZRK6 1079 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 HASPINQ8TF76 798 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 KCNN1Q92952 543 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 DHX58Q96C10 678 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 B3GALT6Q96L58 329 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 ZMAT2Q96NC0 199 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 PPP1R10Q96QC0 940 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 RPS6KC1Q96S38 1066 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 UHRF1Q96T88 793 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 TCHPQ9BT92 498 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 APOL5Q9BWW9 433 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 GOLGA2P5Q9HBQ8 144 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 TBC1D7Q9P0N9 293 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 TBX20Q9UMR3 447 aa11.22□□□□□ -0.61
GTF3C1-213ENST00000571886 VWA8A3KMH1 1905 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 MUC3AQ02505 3323 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 ZMYM2Q9UBW7 1377 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 BDP1A6H8Y1 2624 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 C2CD2LO14523 706 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 TOM1L1O75674 476 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 MCF2P10911 925 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 CASP1P29466 404 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 TNFSF9P41273 254 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms