RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CYP3A7P24462 503 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 TARSP26639 723 aaKnown RBP12.63□□□□□ -0.39
CHMP6-202ENST00000571457 NPEPPSP55786 919 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 NTHL1P78549 312 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 ADCY1Q08828 1119 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 GRIK3Q13003 919 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 MXD4Q14582 209 aaPredicted RBP12.63□□□□□ -0.39
CHMP6-202ENST00000571457 TSGA10IPQ3SY00 556 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 PDXDC1Q6P996 788 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 CELF5Q8N6W0 485 aaKnown RBP12.63□□□□□ -0.39
CHMP6-202ENST00000571457 DDX1Q92499 740 aaKnown RBP12.63□□□□□ -0.39
CHMP6-202ENST00000571457 KXD1Q9BQD3 176 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 IER2Q9BTL4 223 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 TTPALQ9BTX7 342 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 APOL6Q9BWW8 343 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 RNF26Q9BY78 433 aaPredicted RBP12.63□□□□□ -0.39
CHMP6-202ENST00000571457 CSRNP2Q9H175 543 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 PARD6AQ9NPB6 346 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 SH3GLB2Q9NR46 395 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 MIOSQ9NXC5 875 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 HES2Q9Y543 173 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 FASNP49327 2511 aaKnown RBP12.62□□□□□ -0.39
CHMP6-202ENST00000571457 MAN2B1O00754 1011 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 TSPAN1O60635 241 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 ECI2O75521 394 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 RETP07949 1114 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 NLRP5P59047 1200 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 SPEM2Q0P670 501 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 MTAPQ13126 283 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 TFDP1Q14186 410 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 HSP90AA2PQ14568 343 aaPredicted RBP12.62□□□□□ -0.39
CHMP6-202ENST00000571457 UVSSAQ2YD98 709 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 PABPC1LQ4VXU2 614 aaKnown RBP12.62□□□□□ -0.39
CHMP6-202ENST00000571457 TSSK4Q6SA08 328 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 MOXD1Q6UVY6 613 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 PRSS55Q6UWB4 352 aaPredicted RBP12.62□□□□□ -0.39
CHMP6-202ENST00000571457 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 RTL10Q7L3V2 364 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 ITFG1Q8TB96 612 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 ETNPPLQ8TBG4 499 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 PIK3R5Q8WYR1 880 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 CLSTN3Q9BQT9 956 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 GDE1Q9NZC3 331 aa12.62□□□□□ -0.39
CHMP6-202ENST00000571457 INO80B-WBP1J3KQ70 363 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 CCL16O15467 120 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 TDP2O95551 362 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 P4HBP07237 508 aaKnown RBP12.61□□□□□ -0.39
CHMP6-202ENST00000571457 PTENP60484 403 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 POU5F1BQ06416 359 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 DMWDQ09019 674 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 ELAVL2Q12926 359 aaKnown RBP12.61□□□□□ -0.39
CHMP6-202ENST00000571457 EMC2Q15006 297 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 PSMD5Q16401 504 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 RTP2Q5QGT7 225 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 NPAS3Q8IXF0 933 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 SLC7A14Q8TBB6 771 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 DNASE1L2Q92874 299 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 CPB2Q96IY4 423 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 SLKQ9H2G2 1235 aaPredicted RBP12.61□□□□□ -0.39
CHMP6-202ENST00000571457 VPS54Q9P1Q0 977 aa12.61□□□□□ -0.39
CHMP6-202ENST00000571457 DDX25Q9UHL0 483 aaKnown RBP12.61□□□□□ -0.39
CHMP6-202ENST00000571457 MRPS23Q9Y3D9 190 aaKnown RBP12.61□□□□□ -0.39
CHMP6-202ENST00000571457 NID2Q14112 1375 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.6□□□□□ -0.39
CHMP6-202ENST00000571457 AKAP5P24588 427 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 CCR3P51677 355 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 PPP2R5CQ13362 524 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 TUSC3Q13454 348 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 AXDND1Q5T1B0 1012 aaPredicted RBP12.6□□□□□ -0.39
CHMP6-202ENST00000571457 FAM171A1Q5VUB5 890 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 SLC27A1Q6PCB7 646 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 CEP57Q86XR8 500 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
CHMP6-202ENST00000571457 C4orf19Q8IY42 314 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
CHMP6-202ENST00000571457 GSTCDQ8NEC7 633 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 LNX1Q8TBB1 728 aaPredicted RBP12.6□□□□□ -0.39
CHMP6-202ENST00000571457 MTRQ99707 1265 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 CHRDQ9H2X0 955 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 NXF3Q9H4D5 531 aaKnown RBP12.6□□□□□ -0.39
CHMP6-202ENST00000571457 HEBP1Q9NRV9 189 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 ANGPTL2Q9UKU9 493 aa12.6□□□□□ -0.39
CHMP6-202ENST00000571457 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.6□□□□□ -0.39
CHMP6-202ENST00000571457 COL4A3Q01955 1670 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 EML1O00423 815 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 IFNAR1P17181 557 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 ARF4P18085 180 aaPredicted RBP12.59□□□□□ -0.39
CHMP6-202ENST00000571457 YWHABP31946 246 aaKnown RBP12.59□□□□□ -0.39
CHMP6-202ENST00000571457 FZD5Q13467 585 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 CSRP2Q16527 193 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 LPAL2Q16609 132 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 PRR23BQ6ZRT6 265 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
CHMP6-202ENST00000571457 RABGGTAQ92696 567 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms