RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 VPS52Q8N1B4 723 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 SLC39A11Q8N1S5 342 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 SYT2Q8N9I0 419 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-205ENST00000571028 FSIP1Q8NA03 581 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 ASAP3Q8TDY4 903 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 LARP4BQ92615 738 aaKnown RBP14.68□□□□□ -0.06
CCDC40-205ENST00000571028 STAMQ92783 540 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 FDXACB1Q9BRP7 624 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-205ENST00000571028 MRPL9Q9BYD2 267 aaKnown RBP14.68□□□□□ -0.06
CCDC40-205ENST00000571028 ZHX3Q9H4I2 956 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 COL4A3BPQ9Y5P4 624 aa14.68□□□□□ -0.06
CCDC40-205ENST00000571028 SFI1A8K8P3 1242 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 GAS2O43903 313 aaKnown RBP14.67□□□□□ -0.06
CCDC40-205ENST00000571028 HIP1RO75146 1068 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 GPR32O75388 356 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 PFKFB1P16118 471 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 EPCAMP16422 314 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 LIG1P18858 919 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 FGFR4P22455 802 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 GPC3P51654 580 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 SLC12A3P55017 1021 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 LAMTOR4Q0VGL1 99 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 KANK3Q6NY19 840 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 SV2BQ7L1I2 683 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 MCPH1Q8NEM0 835 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 RIN2Q8WYP3 895 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-205ENST00000571028 RUBCNQ92622 972 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 ADAMTS10Q9H324 1103 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 SFXN1Q9H9B4 322 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 STK17AQ9UEE5 414 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 KCNH3Q9ULD8 1083 aa14.67□□□□□ -0.06
CCDC40-205ENST00000571028 FNDC1Q4ZHG4 1894 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-205ENST00000571028 CARNS1A5YM72 827 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 LRRIQ4A6NIV6 560 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 NT5C1B-RDH14C9J2C7 533 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 KRT37O76014 449 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 GLRA2P23416 452 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 CMA1P23946 247 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 BCAR1P56945 870 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 DSC3Q14574 896 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 C1orf186Q6ZWK4 172 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 DYMQ7RTS9 669 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 PPFIBP1Q86W92 1011 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 ECHDC2Q86YB7 292 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 IQUBQ8NA54 791 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 RNF149Q8NC42 400 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 HELQQ8TDG4 1101 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 AUTS2Q8WXX7 1259 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 CNTNAP3BQ96NU0 1288 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 CNTNAP3Q9BZ76 1288 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 GCOM2Q9BZD3 368 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-205ENST00000571028 GOLPH3LQ9H4A5 285 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 KCNK12Q9HB15 430 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 IGSF9Q9P2J2 1179 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 SERTAD1Q9UHV2 236 aa14.66□□□□□ -0.06
CCDC40-205ENST00000571028 ZC3H11AO75152 810 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC40-205ENST00000571028 GADD45BO75293 160 aaPredicted RBP14.65□□□□□ -0.06
CCDC40-205ENST00000571028 CFHP08603 1231 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 ARL2P36404 184 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 AFMP43652 599 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 NDUFA8P51970 172 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 CAPSQ13938 189 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 TFDP1Q14186 410 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 MXD4Q14582 209 aaPredicted RBP14.65□□□□□ -0.06
CCDC40-205ENST00000571028 ARSHQ5FYA8 562 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 CEP57L1Q8IYX8 460 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 KCTD17Q8N5Z5 321 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 DEPTORQ8TB45 409 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 BSNDQ8WZ55 320 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 IFT74Q96LB3 600 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 ZBP1Q9H171 429 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 RNF19AQ9NV58 838 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 EVPLQ92817 2033 aa14.65□□□□□ -0.06
CCDC40-205ENST00000571028 A0A1W2PQ27 194 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 A0A1W2PQ64 194 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 A0A1W2PQD8 194 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 CCDC169A6NNP5 214 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 ASAP2O43150 1006 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 PRPF40AO75400 957 aaKnown RBP14.64□□□□□ -0.07
CCDC40-205ENST00000571028 FAM13AO94988 1023 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 IDEP14735 1019 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 DARSP14868 501 aaKnown RBP14.64□□□□□ -0.07
CCDC40-205ENST00000571028 SYKP43405 635 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 PEX3P56589 373 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 CLLU1OSQ5K130 101 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 GPR149Q86SP6 731 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 GRAMD1CQ8IYS0 662 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 REEP2Q9BRK0 252 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 KIFC3Q9BVG8 833 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 EMILIN2Q9BXX0 1053 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 WNT16Q9UBV4 365 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 CA14Q9ULX7 337 aa14.64□□□□□ -0.07
CCDC40-205ENST00000571028 TCHHQ07283 1943 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 ZNF292O60281 2723 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 MYMKA6NI61 221 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 INO80B-WBP1J3KQ70 363 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 TBCAO75347 108 aaKnown RBP14.63□□□□□ -0.07
CCDC40-205ENST00000571028 CTSAP10619 480 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 SDHBP21912 280 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 EIF4BP23588 611 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 206.5 ms