RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 TARS2Q9BW92 718 aaKnown RBP5.95□□□□□ -1.46
CHD3-212ENST00000570758 COLEC11Q9BWP8 271 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 GPR62Q9BZJ7 368 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 NT5C3AQ9H0P0 336 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 CDT1Q9H211 546 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 TMEM134Q9H6X4 195 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 PTPRHQ9HD43 1115 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 C11orf16Q9NQ32 467 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 FBXO2Q9UK22 296 aaPredicted RBP5.95□□□□□ -1.46
CHD3-212ENST00000570758 TNFSF13BQ9Y275 285 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 GTF3C3Q9Y5Q9 886 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 IRAK3Q9Y616 596 aa5.95□□□□□ -1.46
CHD3-212ENST00000570758 TADA2AO75478 443 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 KIF4AO95239 1232 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 URODP06132 367 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 THP07101 528 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 SRGAP2BP0DMP2 458 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 MYBP10242 640 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 HARSP12081 509 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 PLS3P13797 630 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 HOXB8P17481 243 aaPredicted RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 PROZP22891 400 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 SP100P23497 879 aaPredicted RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 KLRC2P26717 231 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 UBA7P41226 1012 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 GRM5P41594 1212 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 GLUD2P49448 558 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 CLCN4P51793 760 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 NCKAP1LP55160 1127 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 DSG1Q02413 1049 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 CEBPZQ03701 1054 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 TUSC3Q13454 348 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 GIT2Q14161 759 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 DHX8Q14562 1220 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 HSP90AA2PQ14568 343 aaPredicted RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 CBX2Q14781 532 aaPredicted RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 ZNF568Q3ZCX4 644 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 TPRNQ4KMQ1 711 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 SEZ6Q53EL9 994 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 GLRA4Q5JXX5 417 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 SPECC1Q5M775 1068 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 CD300LGQ6UXG3 332 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 GPBP1Q86WP2 473 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 RNF135Q8IUD6 432 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 KCTD17Q8N5Z5 321 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 TMEM87AQ8NBN3 555 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 TMEM161BQ8NDZ6 487 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 HASPINQ8TF76 798 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 RAD54LQ92698 747 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 CALML4Q96GE6 196 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 EPSTI1Q96J88 318 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 RPGRIP1Q96KN7 1286 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 FBXL18Q96ME1 805 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 PPP1R10Q96QC0 940 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 USP28Q96RU2 1077 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 POP1Q99575 1024 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 REEP2Q9BRK0 252 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 NTPCRQ9BSD7 190 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 LRFN3Q9BTN0 628 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 TIPINQ9BVW5 301 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 PHF7Q9BWX1 381 aaPredicted RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 EMILIN2Q9BXX0 1053 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 MRPL4Q9BYD3 311 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 CCSER1Q9C0I3 900 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 HAPLN2Q9GZV7 340 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 ADAM7Q9H2U9 754 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 POMKQ9H5K3 350 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 C17orf75Q9HAS0 396 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 RXFP1Q9HBX9 757 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 MRPL17Q9NRX2 175 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 CHST7Q9NS84 486 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 MUTYHQ9UIF7 546 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 ADAM28Q9UKQ2 775 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 RBM19Q9Y4C8 960 aaKnown RBP5.94□□□□□ -1.46
CHD3-212ENST00000570758 XIRP2A4UGR9 3374 aa5.94□□□□□ -1.46
CHD3-212ENST00000570758 TDRD15B5MCY1 1934 aaKnown RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 A0A087X0B3 334 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 SMIM28A0A1B0GU29 152 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 TEX28O15482 410 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 DCXO43602 365 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 STX6O43752 255 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 GPR37L1O60883 481 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 NR1I2O75469 434 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 BRD1O95696 1058 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 MCF2P10911 925 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 RPL17P18621 184 aaKnown RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 COL9A1P20849 921 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 OSTNP61366 133 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 SOX4Q06945 474 aaPredicted RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 XKR4Q5GH76 650 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 HERC4Q5GLZ8 1057 aaPredicted RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 TMEM31Q5JXX7 168 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 RTP2Q5QGT7 225 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 FOXD4L5Q5VV16 416 aaPredicted RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 KIAA1841Q6NSI8 718 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 PRSS55Q6UWB4 352 aaPredicted RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 MPZL3Q6UWV2 235 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 ALKAL1Q6UXT8 129 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 TMC5Q6UXY8 1006 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms