RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 IRGCQ6NXR0 463 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 LRRC47Q8N1G4 583 aaKnown RBP16.47■□□□□ 0.23
SMG6-207ENST00000570756 CD101Q93033 1021 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 TBC1D10AQ9BXI6 508 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 MTMR4Q9NYA4 1195 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 STOML1Q9UBI4 398 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 FRMD4BQ9Y2L6 1034 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 PLIN4Q96Q06 1357 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 MEIS1O00470 390 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 HNRNPCL1O60812 293 aaKnown RBP16.47■□□□□ 0.23
SMG6-207ENST00000570756 PPP1R11O60927 126 aaPredicted RBP16.47■□□□□ 0.23
SMG6-207ENST00000570756 KYNUQ16719 465 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 MOXD1Q6UVY6 613 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 RIBC1Q8N443 379 aaPredicted RBP16.47■□□□□ 0.23
SMG6-207ENST00000570756 RTFDC1Q9BY42 306 aaPredicted RBP16.47■□□□□ 0.23
SMG6-207ENST00000570756 KIAA1683Q9H0B3 1180 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 CHKBQ9Y259 395 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 SPDYE5A6NIY4 337 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 TRAFD1O14545 582 aaPredicted RBP16.46■□□□□ 0.23
SMG6-207ENST00000570756 ZBTB5O15062 677 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 LRRN2O75325 713 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 APBA3O96018 575 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 FOXN2P32314 431 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 CHKAP35790 457 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 BTDP43251 543 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 ZNF543Q08ER8 600 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 NR1H3Q13133 447 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 STAT4Q14765 748 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 SGO2Q562F6 1265 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 GRK7Q8WTQ7 553 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 MBOAT7Q96N66 472 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 SYT15Q9BQS2 421 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 TBK1Q9UHD2 729 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 PHTF1Q9UMS5 762 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 NAALADL1Q9UQQ1 740 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 USP20Q9Y2K6 914 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 MYH14Q7Z406 1995 aaKnown RBP16.46■□□□□ 0.23
SMG6-207ENST00000570756 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 A0A1W2PRG0 241 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 RSPH10B2B2RC85 870 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 TP73O15350 636 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 GAS8O95995 478 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 RSPH10BP0C881 870 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 GM2AP17900 193 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 KCNA1Q09470 495 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 ZRSR2Q15696 482 aaKnown RBP16.46■□□□□ 0.23
SMG6-207ENST00000570756 CBWD6Q4V339 395 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 CBWD3Q5JTY5 395 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 CBWD5Q5RIA9 395 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 MTHFD1LQ6UB35 978 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 HS2ST1Q7LGA3 356 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 LINC00116Q8NCU8 138 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 PAIP2Q9BPZ3 127 aaKnown RBP16.46■□□□□ 0.23
SMG6-207ENST00000570756 TRAIPQ9BWF2 469 aa16.46■□□□□ 0.23
SMG6-207ENST00000570756 MROH7Q68CQ1 1323 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 FAM170AA1A519 330 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 RASA4BC9J798 803 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 FOXN3O00409 490 aaPredicted RBP16.45■□□□□ 0.22
SMG6-207ENST00000570756 TBX3O15119 743 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 NVLO15381 856 aaKnown RBP16.45■□□□□ 0.22
SMG6-207ENST00000570756 RASA4O43374 803 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 GSTA2P09210 222 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 SPATA31C1P0DKV0 1188 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 SP100P23497 879 aaPredicted RBP16.45■□□□□ 0.22
SMG6-207ENST00000570756 SPIRE1Q08AE8 756 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 CYP4X1Q8N118 509 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 MAIP1Q8WWC4 291 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 RUSC1Q9BVN2 902 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 ANO3Q9BYT9 981 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 UBN1Q9NPG3 1134 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMG6-207ENST00000570756 NINJ2Q9NZG7 142 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 SCOCQ9UIL1 159 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
SMG6-207ENST00000570756 LRCH1Q9Y2L9 728 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 C2CD2Q9Y426 696 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 FOXO6A8MYZ6 492 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 H0Y3Z8 333 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 UPP2O95045 317 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 DLATP10515 647 aaKnown RBP16.45■□□□□ 0.22
SMG6-207ENST00000570756 ATF2P15336 505 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 MARK3P27448 753 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 EPHB2P29323 1055 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 VHLP40337 213 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 MOGSQ13724 837 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 PTK6Q13882 451 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 RGS9BPQ6ZS82 235 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 LRRC8CQ8TDW0 803 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 SLC7A6OSQ96CW6 309 aaPredicted RBP16.45■□□□□ 0.22
SMG6-207ENST00000570756 TRAPPC9Q96Q05 1148 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 POP1Q99575 1024 aaKnown RBP16.45■□□□□ 0.22
SMG6-207ENST00000570756 BHMT2Q9H2M3 363 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 WDR35Q9P2L0 1181 aa16.45■□□□□ 0.22
SMG6-207ENST00000570756 ZMYM2Q9UBW7 1377 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 IRS2Q9Y4H2 1338 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 FAM13AO94988 1023 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 SKIP12755 728 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms