RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 PLAAQ9Y263 795 aa7.14□□□□□ -1.27
UBFD1-209ENST00000569919 BACE2Q9Y5Z0 518 aa7.14□□□□□ -1.27
UBFD1-209ENST00000569919 SIPA1L1O43166 1804 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 SYNRGQ9UMZ2 1314 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 SSU72P8A0A1W2PR75 194 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 MPHOSPH10O00566 681 aaKnown RBP7.13□□□□□ -1.27
UBFD1-209ENST00000569919 DNAJC6O75061 913 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 RFPL3O75679 317 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 CABYRO75952 493 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 ZNF205O95201 554 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 SNAI1O95863 264 aaPredicted RBP7.13□□□□□ -1.27
UBFD1-209ENST00000569919 GNAI3P08754 354 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 C6orf222P0C671 652 aaPredicted RBP7.13□□□□□ -1.27
UBFD1-209ENST00000569919 ALADP13716 330 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 ATP2A2P16615 1042 aaKnown RBP7.13□□□□□ -1.27
UBFD1-209ENST00000569919 SHMT1P34896 483 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 RABGGTBP53611 331 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 GJA9P57773 515 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 MTX1Q13505 466 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 TMEM132BQ14DG7 1078 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 NTRK3Q16288 839 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 DENND5AQ6IQ26 1287 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 MAMDC4Q6UXC1 1216 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 DHX37Q8IY37 1157 aaKnown RBP7.13□□□□□ -1.27
UBFD1-209ENST00000569919 KREMEN2Q8NCW0 462 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 DDX11Q96FC9 970 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 ABHD16BQ9H3Z7 469 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 HIPK3Q9H422 1215 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 SH2D4AQ9H788 454 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 ATP13A1Q9HD20 1204 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 GPR108Q9NPR9 543 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 RNF112Q9ULX5 631 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 BDP1A6H8Y1 2624 aa7.13□□□□□ -1.27
UBFD1-209ENST00000569919 KIF28PB7ZC32 967 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 RFXAPO00287 272 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 WDR46O15213 610 aaKnown RBP7.12□□□□□ -1.27
UBFD1-209ENST00000569919 TGFB1P01137 390 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 THBDP07204 575 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 PFKMP08237 780 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 GSTM1P09488 218 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 MASP1P48740 699 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 SEPHS1P49903 392 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 PLCD1P51178 756 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 CCL23P55773 120 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 NKX3-2P78367 333 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 ACVR2BQ13705 512 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 RTP2Q5QGT7 225 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 TMEM179Q6ZVK1 233 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 TMPRSS7Q7RTY8 843 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 CREG2Q8IUH2 290 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 PHOSPHO2Q8TCD6 241 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 FRS2Q8WU20 508 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 GPATCH3Q96I76 525 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 API5Q9BZZ5 524 aaKnown RBP7.12□□□□□ -1.27
UBFD1-209ENST00000569919 UPF3AQ9H1J1 476 aaKnown RBP7.12□□□□□ -1.27
UBFD1-209ENST00000569919 VCPKMTQ9H867 229 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 LMCD1Q9NZU5 365 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 TMX2Q9Y320 296 aa7.12□□□□□ -1.27
UBFD1-209ENST00000569919 CDK5RAP2Q96SN8 1893 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 MYADML2A6NDP7 307 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 VWA5AO00534 786 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 IDH1O75874 414 aaKnown RBP7.11□□□□□ -1.27
UBFD1-209ENST00000569919 ESR1P03372 595 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 FURINP09958 794 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 ACTN1P12814 892 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 MYOGP15173 224 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 GABREP78334 506 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 GABPAQ06546 454 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 ITGA7Q13683 1181 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 PTPROQ16827 1216 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 TRIM61Q5EBN2 209 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 KIAA1755Q5JYT7 1200 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 PRSS36Q5K4E3 855 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 RCSD1Q6JBY9 416 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 RNF111Q6ZNA4 994 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 USP53Q70EK8 1073 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 SPICE1Q8N0Z3 855 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 MAGEB6Q8N7X4 407 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 MIGA1Q8NAN2 632 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 SLC7A14Q8TBB6 771 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 ASB11Q8WXH4 323 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 PTPRN2Q92932 1015 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 MFSD3Q96ES6 412 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 HRASLS5Q96KN8 279 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 CCDC17Q96LX7 622 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 UIMC1Q96RL1 719 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 MEIS3Q99687 375 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 TMX1Q9H3N1 280 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 SMC4Q9NTJ3 1288 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 SWAP70Q9UH65 585 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 NDOR1Q9UHB4 597 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 SFMBT1Q9UHJ3 866 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 ZHX1Q9UKY1 873 aaPredicted RBP7.11□□□□□ -1.27
UBFD1-209ENST00000569919 NOB1Q9ULX3 412 aaKnown RBP7.11□□□□□ -1.27
UBFD1-209ENST00000569919 MYH1P12882 1939 aa7.11□□□□□ -1.27
UBFD1-209ENST00000569919 MUC3AQ02505 3323 aa7.1□□□□□ -1.27
UBFD1-209ENST00000569919 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.1□□□□□ -1.27
UBFD1-209ENST00000569919 ZEB2O60315 1214 aa7.1□□□□□ -1.27
UBFD1-209ENST00000569919 IGHA1P01876 353 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms