RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 FBLIM1Q8WUP2 373 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 SNRNP27Q8WVK2 155 aaKnown RBP7.04□□□□□ -1.28
LINC00556-201ENST00000569603 PIGSQ96S52 555 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 MAP3K14Q99558 947 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 SPZ1Q9BXG8 430 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 OSBPL1AQ9BXW6 950 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 BHLHE41Q9C0J9 482 aaPredicted RBP7.04□□□□□ -1.28
LINC00556-201ENST00000569603 LY9Q9HBG7 655 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 VAT1LQ9HCJ6 419 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 CCDC39Q9UFE4 941 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 NLRC5Q86WI3 1866 aa7.04□□□□□ -1.28
LINC00556-201ENST00000569603 PNMA6FA0A0J9YX94 578 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 ABHD14A-ACY1A0A1B0GW23 586 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 FAM95CA0A1B0GW59 222 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 METTL12A8MUP2 240 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 MEIS2O14770 477 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 PHACTR2O75167 634 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 GGPS1O95749 300 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 LINC00271P0C7V0 271 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 ACTN1P12814 892 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 SMARCA1P28370 1054 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 ADMP35318 185 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 ERVK-21P61565 698 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 HTRA4P83105 476 aaPredicted RBP7.03□□□□□ -1.28
LINC00556-201ENST00000569603 GRB10Q13322 594 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 COL19A1Q14993 1142 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 NFKBIBQ15653 356 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 CCDC85BQ15834 202 aaPredicted RBP7.03□□□□□ -1.28
LINC00556-201ENST00000569603 PLEKHG4Q58EX7 1191 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 PEAR1Q5VY43 1037 aaPredicted RBP7.03□□□□□ -1.28
LINC00556-201ENST00000569603 CNKSR3Q6P9H4 555 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 KCNV1Q6PIU1 500 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 METTL7BQ6UX53 244 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 CHST3Q7LGC8 479 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 PDILTQ8N807 584 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 C2CD4AQ8NCU7 369 aaPredicted RBP7.03□□□□□ -1.28
LINC00556-201ENST00000569603 PMEPA1Q969W9 287 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 NECAB3Q96P71 396 aaPredicted RBP7.03□□□□□ -1.28
LINC00556-201ENST00000569603 INO80BQ9C086 356 aaPredicted RBP7.03□□□□□ -1.28
LINC00556-201ENST00000569603 NRSN2Q9GZP1 204 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 LSG1Q9H089 658 aaKnown RBP7.03□□□□□ -1.28
LINC00556-201ENST00000569603 PIF1Q9H611 641 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 SOX17Q9H6I2 414 aaPredicted RBP7.03□□□□□ -1.28
LINC00556-201ENST00000569603 CYP4F12Q9HCS2 524 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 MRVI1Q9Y6F6 885 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 LOXHD1Q8IVV2 1947 aa7.03□□□□□ -1.28
LINC00556-201ENST00000569603 RALGAPA2Q2PPJ7 1873 aa7.02□□□□□ -1.28
LINC00556-201ENST00000569603 RIF1Q5UIP0 2472 aaKnown RBP7.02□□□□□ -1.29
LINC00556-201ENST00000569603 SPTBN4Q9H254 2564 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 WDR81Q562E7 1941 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 LINC01553A4QN01 128 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 ANKRD33BA6NCL7 494 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 GCOM1H8Y6P7 765 aaPredicted RBP7.02□□□□□ -1.29
LINC00556-201ENST00000569603 IFIT3O14879 490 aaKnown RBP7.02□□□□□ -1.29
LINC00556-201ENST00000569603 STAM2O75886 525 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 LGALS2P05162 132 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 POLR2MP0CAP2 368 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 EDN3P14138 238 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 ATP2B1P20020 1258 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 KCNQ1P51787 676 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 C7orf31Q8N865 590 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 TTC16Q8NEE8 873 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 SNX29Q8TEQ0 813 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 PPM1EQ8WY54 764 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 SPATA33Q96N06 139 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 GPR20Q99678 358 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 KATNAL1Q9BW62 490 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 CERS4Q9HA82 394 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 RC3H2Q9HBD1 1191 aaKnown RBP7.02□□□□□ -1.29
LINC00556-201ENST00000569603 PCDH12Q9NPG4 1184 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 LMCD1Q9NZU5 365 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 TCEAL9Q9UHQ7 104 aa7.02□□□□□ -1.29
LINC00556-201ENST00000569603 TECTAO75443 2155 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.01□□□□□ -1.29
LINC00556-201ENST00000569603 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.01□□□□□ -1.29
LINC00556-201ENST00000569603 H3BRB1 525 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 SH2B2O14492 632 aaPredicted RBP7.01□□□□□ -1.29
LINC00556-201ENST00000569603 TREHO43280 583 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 CAND2O75155 1236 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 DDAH1O94760 285 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 PLEKHA8P1O95397 391 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 PRNPP04156 253 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 SMIM10L2AP0DMW4 78 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 SMIM10L2BP0DMW5 78 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 MYCLP12524 364 aaPredicted RBP7.01□□□□□ -1.29
LINC00556-201ENST00000569603 KCNA2P16389 499 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 ITGB5P18084 799 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 CCND2P30279 289 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 MAN1A1P33908 653 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.29
LINC00556-201ENST00000569603 GSTM4Q03013 218 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 WTAPQ15007 396 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 NECTIN1Q15223 517 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 PCNX4Q63HM2 1172 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 PAOXQ6QHF9 649 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 USP17L6PQ6QN14 398 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.01□□□□□ -1.29
LINC00556-201ENST00000569603 RPAINQ86UA6 219 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 HOMER1Q86YM7 354 aa7.01□□□□□ -1.29
LINC00556-201ENST00000569603 FMNL3Q8IVF7 1028 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms