RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MCCD1P59942 119 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-212ENST00000569575 TPD52L1Q16890 204 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-212ENST00000569575 FAM114A1Q8IWE2 563 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 SMG8Q8ND04 991 aaKnown RBP25.55■■□□□ 1.68
RAB40C-212ENST00000569575 LINC01599Q8WXQ3 324 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 GDF15Q99988 308 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 DNAJC25Q9H1X3 360 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 TSPY26PQ9H489 355 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 ASB7Q9H672 318 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 METTL14Q9HCE5 456 aaKnown RBP25.55■■□□□ 1.68
RAB40C-212ENST00000569575 LRFN2Q9ULH4 789 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 USP20Q9Y2K6 914 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.54■■□□□ 1.68
RAB40C-212ENST00000569575 IL18RAPO95256 599 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 PMS1P54277 932 aaKnown RBP25.54■■□□□ 1.68
RAB40C-212ENST00000569575 MYL5Q02045 173 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 NT5DC4Q86YG4 428 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 THNSL1Q8IYQ7 743 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 CRIPAKQ8N1N5 446 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 TOP1MTQ969P6 601 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 SLC9A7Q96T83 725 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.54■■□□□ 1.68
RAB40C-212ENST00000569575 HAPLN2Q9GZV7 340 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 GZF1Q9H116 711 aaPredicted RBP25.54■■□□□ 1.68
RAB40C-212ENST00000569575 THAP9Q9H5L6 903 aa25.54■■□□□ 1.68
RAB40C-212ENST00000569575 RPF1Q9H9Y2 349 aaKnown RBP25.54■■□□□ 1.68
RAB40C-212ENST00000569575 INPPL1O15357 1258 aa25.53■■□□□ 1.68
RAB40C-212ENST00000569575 WDR5P61964 334 aaKnown RBP25.53■■□□□ 1.68
RAB40C-212ENST00000569575 SNRNP35Q16560 246 aaKnown RBP25.53■■□□□ 1.68
RAB40C-212ENST00000569575 RASIP1Q5U651 963 aa25.53■■□□□ 1.68
RAB40C-212ENST00000569575 INTS8Q75QN2 995 aaKnown RBP25.53■■□□□ 1.68
RAB40C-212ENST00000569575 CDR2LQ86X02 465 aaPredicted RBP25.53■■□□□ 1.68
RAB40C-212ENST00000569575 DUSP9Q99956 384 aaKnown RBP25.53■■□□□ 1.68
RAB40C-212ENST00000569575 KANSL3Q9P2N6 904 aa25.53■■□□□ 1.68
RAB40C-212ENST00000569575 CARNS1A5YM72 827 aa25.52■■□□□ 1.68
RAB40C-212ENST00000569575 TISP43B9A030 160 aa25.52■■□□□ 1.68
RAB40C-212ENST00000569575 EPB41P11171 864 aaKnown RBP25.52■■□□□ 1.68
RAB40C-212ENST00000569575 CYP2J2P51589 502 aa25.52■■□□□ 1.68
RAB40C-212ENST00000569575 LRRC55Q6ZSA7 311 aa25.52■■□□□ 1.68
RAB40C-212ENST00000569575 C11orf57Q6ZUT1 292 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-212ENST00000569575 OTOP2Q7RTS6 562 aa25.52■■□□□ 1.68
RAB40C-212ENST00000569575 IKZF4Q9H2S9 585 aa25.52■■□□□ 1.68
RAB40C-212ENST00000569575 PCIF1Q9H4Z3 704 aa25.52■■□□□ 1.68
RAB40C-212ENST00000569575 DERAQ9Y315 318 aa25.52■■□□□ 1.68
RAB40C-212ENST00000569575 TRIM49BA6NDI0 452 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 H0YGN5 161 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 MARSP56192 900 aaKnown RBP25.51■■□□□ 1.67
RAB40C-212ENST00000569575 STX17P56962 302 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 TCTN1Q2MV58 587 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 XKR4Q5GH76 650 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 GLB1LQ6UWU2 654 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 CRELD2Q6UXH1 353 aaPredicted RBP25.51■■□□□ 1.67
RAB40C-212ENST00000569575 FRMD5Q7Z6J6 570 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 BRSK2Q8IWQ3 736 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 FAM200AQ8TCP9 573 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 MFSD14AQ96MC6 490 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 FAM213AQ9BRX8 229 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 SRRTQ9BXP5 876 aaKnown RBP25.51■■□□□ 1.67
RAB40C-212ENST00000569575 NXF3Q9H4D5 531 aaKnown RBP25.51■■□□□ 1.67
RAB40C-212ENST00000569575 RSAD1Q9HA92 442 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 SLC4A7Q9Y6M7 1214 aa25.51■■□□□ 1.67
RAB40C-212ENST00000569575 BECN2A8MW95 431 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 CITO14578 2027 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 HARSP12081 509 aaKnown RBP25.5■■□□□ 1.67
RAB40C-212ENST00000569575 ATF7P17544 494 aaPredicted RBP25.5■■□□□ 1.67
RAB40C-212ENST00000569575 AP3M2P53677 418 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 EPHB4P54760 987 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 TPM4P67936 248 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 PPP2R3AQ06190 1150 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 CEP135Q66GS9 1140 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 ALKAL1Q6UXT8 129 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 TMC2Q8TDI7 906 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 UBE2OQ9C0C9 1292 aaKnown RBP25.5■■□□□ 1.67
RAB40C-212ENST00000569575 SNTG2Q9NY99 539 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 PARP2Q9UGN5 583 aa25.5■■□□□ 1.67
RAB40C-212ENST00000569575 TTC26A0AVF1 554 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 XPOTO43592 962 aaKnown RBP25.49■■□□□ 1.67
RAB40C-212ENST00000569575 CAPN15O75808 1086 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 KRT13P13646 458 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 ACOT2P49753 483 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 SPAG1Q07617 926 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 AGMOQ6ZNB7 445 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 FAM186BQ8IYM0 893 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 ABI1Q8IZP0 508 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 SAAL1Q96ER3 474 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 MED15Q96RN5 788 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 MRPL9Q9BYD2 267 aaKnown RBP25.49■■□□□ 1.67
RAB40C-212ENST00000569575 TMEM117Q9H0C3 514 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 RBAKQ9NYW8 714 aaPredicted RBP25.49■■□□□ 1.67
RAB40C-212ENST00000569575 CNTN3Q9P232 1028 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 C2CD2Q9Y426 696 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 NFE2L3Q9Y4A8 694 aa25.49■■□□□ 1.67
RAB40C-212ENST00000569575 MKI67P46013 3256 aaKnown RBP25.48■■□□□ 1.67
RAB40C-212ENST00000569575 ZBBXA8MT70 800 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 STX10O60499 249 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 AKAP3O75969 853 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 RECQL4O94761 1208 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 KCNE1P15382 129 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 PSMD6Q15008 389 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 ENOX2Q16206 610 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms