RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 URGCPQ8TCY9 931 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 NKD2Q969F2 451 aaPredicted RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CPB2Q96IY4 423 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 GAD1Q99259 594 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PHF20Q9BVI0 1012 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 EMILIN2Q9BXX0 1053 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 GPR62Q9BZJ7 368 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 INO80BQ9C086 356 aaPredicted RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 NXF3Q9H4D5 531 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ZSCAN16Q9H4T2 348 aaPredicted RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 MRPL17Q9NRX2 175 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CHST7Q9NS84 486 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 B4GALT5O43286 388 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 DEXIO95424 95 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CFHP08603 1231 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 GLULP15104 373 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PTENP60484 403 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 MBTD1Q05BQ5 628 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CAPSQ13938 189 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 NONOQ15233 471 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 C4orf19Q8IY42 314 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 TMEM87AQ8NBN3 555 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RNF149Q8NC42 400 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PSPC1Q8WXF1 523 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 TNFRSF25Q93038 417 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 GTF3C6Q969F1 213 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SYAP1Q96A49 352 aaPredicted RBP12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ACSF2Q96CM8 615 aaPredicted RBP12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PGBD4Q96DM1 585 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CEP170P1Q96L14 293 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 EPAS1Q99814 870 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ADAM33Q9BZ11 813 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CXCL16Q9H2A7 254 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 FAN1Q9Y2M0 1017 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 NCOR2Q9Y618 2525 aa12.42□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CACNA1IQ9P0X4 2223 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CCDC195A0A1B0GUA6 201 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CARNS1A5YM72 827 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ANHXE9PGG2 379 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 TGM5O43548 720 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 LETM1O95202 739 aaPredicted RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 GLUD1P00367 558 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 URODP06132 367 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 P4HBP07237 508 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SPATA31D3P0C874 917 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RPL17P18621 184 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 GJB2P29033 226 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 YWHABP31946 246 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RFC5P40937 340 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 GLUD2P49448 558 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SSRP1Q08945 709 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SCRN1Q12765 414 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 HTR4Q13639 388 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CTTNQ14247 550 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 BMS1Q14692 1282 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PPP4R3AQ6IN85 833 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 LILRA6Q6PI73 481 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CPLX2Q6PUV4 134 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SPATA31D4Q6ZUB0 917 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SLC44A3Q8N4M1 653 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SLC7A3Q8WY07 619 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RABGGTAQ92696 567 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 DYDC2Q96IM9 177 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PAAF1Q9BRP4 392 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RPP25Q9BUL9 199 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 IGSF9Q9P2J2 1179 aa12.41□□□□□ -0.42
CHRFAM7A-206ENST00000569278 COL4A2P08572 1712 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CDKL5O76039 1030 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CTDNEP1O95476 244 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ALDH2P05091 517 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 EDN1P05305 212 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ADH1AP07327 375 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SRFP11831 508 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ARF4P18085 180 aaPredicted RBP12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 OR1G1P47890 313 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 STK3Q13188 491 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 EPHA7Q15375 998 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RTP2Q5QGT7 225 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 KRT25Q7Z3Z0 450 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 NEK8Q86SG6 692 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CDR2LQ86X02 465 aaPredicted RBP12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CCDC83Q8IWF9 413 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 MAML2Q8IZL2 1156 aaPredicted RBP12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 GPR152Q8TDT2 470 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SMG7Q92540 1137 aaKnown RBP12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 FAM20AQ96MK3 541 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 JPH2Q9BR39 696 aaPredicted RBP12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 NT5C3AQ9H0P0 336 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 TBC1D17Q9HA65 648 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 LMBRD1Q9NUN5 540 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 KANSL3Q9P2N6 904 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 WNT16Q9UBV4 365 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CA14Q9ULX7 337 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PPME1Q9Y570 386 aa12.4□□□□□ -0.42
CHRFAM7A-206ENST00000569278 R4GN57 208 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms