RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-215ENST00000569095 GDF5P43026 501 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 APBA1Q02410 837 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 PPP3CAQ08209 521 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 RIN1Q13671 783 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 MLC1Q15049 377 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 USP39Q53GS9 565 aaKnown RBP4.28□□□□□ -1.72
CDH11-215ENST00000569095 IFIT1BQ5T764 474 aaKnown RBP4.28□□□□□ -1.72
CDH11-215ENST00000569095 PQLC1Q8N2U9 271 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 CCHCR1Q8TD31 782 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 TSR2Q969E8 191 aaKnown RBP4.28□□□□□ -1.72
CDH11-215ENST00000569095 TMEM176AQ96HP8 235 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 CAMKK2Q96RR4 588 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 GPHA2Q96T91 129 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 SENP6Q9GZR1 1112 aaPredicted RBP4.28□□□□□ -1.72
CDH11-215ENST00000569095 NELFAQ9H3P2 528 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 MANSC1Q9H8J5 431 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 IL23AQ9NPF7 189 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 GOLGA6AQ9NYA3 693 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 GPRC5DQ9NZD1 345 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 ING1Q9UK53 422 aaPredicted RBP4.28□□□□□ -1.72
CDH11-215ENST00000569095 PCDHA13Q9Y5I0 950 aa4.28□□□□□ -1.72
CDH11-215ENST00000569095 PMS2P1A4D2B8 440 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 HTRA2O43464 458 aaPredicted RBP4.27□□□□□ -1.73
CDH11-215ENST00000569095 DTNBO60941 627 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 ITGA10O75578 1167 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 OFD1O75665 1012 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 RAD17O75943 681 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 POU2F2P09086 479 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 HSPA6P17066 643 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 CRHR1P34998 444 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 DGCR2P98153 550 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 MGAT2Q10469 447 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 KLF10Q13118 480 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 GTF2H3Q13889 308 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 GRM7Q14831 915 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 MINDY4Q4G0A6 757 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 RRP12Q5JTH9 1297 aaKnown RBP4.27□□□□□ -1.73
CDH11-215ENST00000569095 FAM111BQ6SJ93 734 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 RSPH3Q86UC2 560 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 ZNF808Q8N4W9 903 aaPredicted RBP4.27□□□□□ -1.73
CDH11-215ENST00000569095 OR7D4Q8NG98 312 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDH11-215ENST00000569095 MDM1Q8TC05 714 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 STON2Q8WXE9 905 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 CFHR4Q92496 578 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 EXTL1Q92935 676 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 CLIP3Q96DZ5 547 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 CCDC136Q96JN2 1154 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 NUP88Q99567 741 aaPredicted RBP4.27□□□□□ -1.73
CDH11-215ENST00000569095 LDAHQ9H6V9 325 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 BCO1Q9HAY6 547 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 LIMCH1Q9UPQ0 1083 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 HDAC5Q9UQL6 1122 aa4.27□□□□□ -1.73
CDH11-215ENST00000569095 NPIPB8E9PQR5 432 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 AP1G1O43747 822 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 ATF3P18847 181 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 MSX2P35548 267 aaPredicted RBP4.26□□□□□ -1.73
CDH11-215ENST00000569095 WASP42768 502 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 GZMKP49863 264 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 HMGA2P52926 109 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 DUSP8Q13202 625 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 IL10RAQ13651 578 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 SAFB2Q14151 953 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDH11-215ENST00000569095 SEPT2Q15019 361 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 CCDC157Q569K6 752 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 HSP90AB2PQ58FF8 381 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 FAM102BQ5T8I3 360 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 IGFL4Q6B9Z1 124 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 CXorf57Q6NSI4 855 aaKnown RBP4.26□□□□□ -1.73
CDH11-215ENST00000569095 RNF207Q6ZRF8 634 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 Q6ZVL8 140 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 CATIPQ7Z7H3 387 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 ADGRE4PQ86SQ3 457 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 DRC7Q8IY82 874 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 GRAMD1CQ8IYS0 662 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 GPR135Q8IZ08 494 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 OR2I1PQ8NGU4 316 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 CYFIP2Q96F07 1278 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 IL17RAQ96F46 866 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 SORCS2Q96PQ0 1159 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 MAP3K14Q99558 947 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 AGO3Q9H9G7 860 aaKnown RBP4.26□□□□□ -1.73
CDH11-215ENST00000569095 LANCL2Q9NS86 450 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 TDP1Q9NUW8 608 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 TMEM140Q9NV12 185 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 TRPS1Q9UHF7 1281 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 SERPINB13Q9UIV8 391 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 IPPQ9Y573 584 aa4.26□□□□□ -1.73
CDH11-215ENST00000569095 FZD7O75084 574 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 MFAP3LO75121 409 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 IL2RBP14784 551 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 SREBF1P36956 1147 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 ADAM8P78325 824 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 HHEXQ03014 270 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 PTH1RQ03431 593 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 FOXL1Q12952 345 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 MST1LQ2TV78 715 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 C3orf36Q3SXR2 165 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 ARHGAP29Q52LW3 1261 aa4.25□□□□□ -1.73
CDH11-215ENST00000569095 FKBP15Q5T1M5 1219 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms