RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	TIGD2	Q4W5G0	525 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	TAF7L	Q5H9L4	462 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	EFCAB12	Q6NXP0	572 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	KCNK18	Q7Z418	384 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	AUTS2	Q8WXX7	1259 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	LENG9	Q96B70	501 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	RAX2	Q96IS3	184 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	ACE2	Q9BYF1	805 aa	Predicted RBP	4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	AKIP1	Q9NQ31	210 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	DNAJC28	Q9NX36	388 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	USP15	Q9Y4E8	981 aa	Predicted RBP	4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	HS3ST4	Q9Y661	456 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	PNPLA7	Q6ZV29	1317 aa		4.21	□□□□□ -1.73
BBS4-215	ENST00000569001	CCDC78	A2IDD5	438 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	GRID2IP	A4D2P6	1211 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	LAG3	P18627	525 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	PROZ	P22891	400 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	NOMO1	Q15155	1222 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	BMT2	Q1RMZ1	405 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	METRNL	Q641Q3	311 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	BEND2	Q8NDZ0	799 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	GPR156	Q8NFN8	814 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	OR2I1P	Q8NGU4	316 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	RAB24	Q969Q5	203 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	AHCYL2	Q96HN2	611 aa	Known RBP	4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	UHRF1	Q96T88	793 aa	Predicted RBP	4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	MYOC	Q99972	504 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	SLC46A2	Q9BY10	475 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	KRTAP17-1	Q9BYP8	105 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	PCDHGA2	Q9Y5H1	932 aa		4.21	□□□□□ -1.74
BBS4-215	ENST00000569001	ATRNL1	Q5VV63	1379 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001		B5MCH6	92 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	GPR39	O43194	453 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	BRINP1	O60477	761 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	RAP2A	P10114	183 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	GSPT1	P15170	499 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	ALOX15	P16050	662 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	SLC6A2	P23975	617 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	CRHR1	P34998	444 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	SREBF1	P36956	1147 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	ALDH1A3	P47895	512 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	INHBE	P58166	350 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	MRPS9	P82933	396 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	TP53BP2	Q13625	1128 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	SEPT2	Q15019	361 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	PTPA	Q15257	358 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	SMN1	Q16637	294 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	LY6G5C	Q5SRR4	150 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	AFMID	Q63HM1	303 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	CMTR2	Q8IYT2	770 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	PQLC1	Q8N2U9	271 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	PPM1N	Q8N819	430 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	CPEB3	Q8NE35	698 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	WDR66	Q8TBY9	1149 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	DPF2	Q92785	391 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	ZG16B	Q96DA0	208 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	ORAI2	Q96SN7	254 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	ADAM2	Q99965	735 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	ZSWIM1	Q9BR11	485 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	WDR11	Q9BZH6	1224 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	SCOC	Q9UIL1	159 aa		4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	RUVBL1	Q9Y265	456 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-215	ENST00000569001	DRGX	A6NNA5	263 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	RNASET2	O00584	256 aa	Known RBP	4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	IGSF3	O75054	1194 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	PRSS23	O95084	383 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	GC	P02774	474 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	BMP5	P22003	454 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	PCSK1	P29120	753 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	ECHS1	P30084	290 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	ZEB1	P37275	1124 aa	Predicted RBP	4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	PLA2G5	P39877	138 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	SLC6A9	P48067	706 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	FLT3LG	P49771	235 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	PER3	P56645	1201 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	NANOS3	P60323	173 aa	Known RBP	4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	ERVK-21	P61565	698 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	BEAN1	Q3B7T3	259 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	MUM1L1	Q5H9M0	696 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	FAM47A	Q5JRC9	791 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	METTL24	Q5JXM2	366 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	HECTD2	Q5U5R9	776 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	MED25	Q71SY5	747 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	OR7D4	Q8NG98	312 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	ATL2	Q8NHH9	583 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	HOXB13	Q92826	284 aa	Predicted RBP	4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	PRRX2	Q99811	253 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	SERHL2	Q9H4I8	314 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	GREM2	Q9H772	168 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	DNM3	Q9UQ16	869 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	SIK3	Q9Y2K2	1263 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	ACTL7A	Q9Y615	435 aa		4.19	□□□□□ -1.74
BBS4-215	ENST00000569001	AATK	Q6ZMQ8	1374 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	TMEM191C	A6NGB0	347 aa		4.18	□□□□□ -1.74
BBS4-215	ENST00000569001	TMEM200C	A6NKL6	621 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms