RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 TRIM6Q9C030 488 aaPredicted RBP16.52■□□□□ 0.24
USB1-214ENST00000568848 POLD4Q9HCU8 107 aa16.52■□□□□ 0.24
USB1-214ENST00000568848 ADAM28Q9UKQ2 775 aa16.52■□□□□ 0.24
USB1-214ENST00000568848 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 NRG2O14511 850 aaPredicted RBP16.51■□□□□ 0.23
USB1-214ENST00000568848 MARCH6O60337 910 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 SLITRK3O94933 977 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 SCRN1Q12765 414 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 NR5A1Q13285 461 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 USP41Q3LFD5 358 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 RUFY3Q7L099 469 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 TCP11Q8WWU5 503 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 FGF13Q92913 245 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 CLSTN3Q9BQT9 956 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 PLA2G2FQ9BZM2 168 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
USB1-214ENST00000568848 SPATA6Q9NWH7 488 aaPredicted RBP16.51■□□□□ 0.23
USB1-214ENST00000568848 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
USB1-214ENST00000568848 I3L4J1 428 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 PTGESO14684 152 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
USB1-214ENST00000568848 TADA2AO75478 443 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 C8AP07357 584 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 LIG1P18858 919 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 ARL2P36404 184 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
USB1-214ENST00000568848 FAM171A1Q5VUB5 890 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 PHLDB3Q6NSJ2 640 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 RSPO2Q6UXX9 243 aaPredicted RBP16.5■□□□□ 0.23
USB1-214ENST00000568848 FAM20AQ96MK3 541 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 CNTNAP3BQ96NU0 1288 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 EIF2AK1Q9BQI3 630 aaKnown RBP16.5■□□□□ 0.23
USB1-214ENST00000568848 CNTNAP3Q9BZ76 1288 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 C22orf23Q9BZE7 217 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 SLC2A4RGQ9NR83 387 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 ZDHHC7Q9NXF8 308 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 SNTG2Q9NY99 539 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 SSX2IPQ9Y2D8 614 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 ACACBO00763 2458 aa16.5■□□□□ 0.23
USB1-214ENST00000568848 CARNS1A5YM72 827 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
USB1-214ENST00000568848 PSMD5Q16401 504 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 GLRA4Q5JXX5 417 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 CNNM3Q8NE01 707 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 LNX1Q8TBB1 728 aaPredicted RBP16.49■□□□□ 0.23
USB1-214ENST00000568848 SLC7A14Q8TBB6 771 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 BSNDQ8WZ55 320 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 RUBCNQ92622 972 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 PLEKHA4Q9H4M7 779 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 ZSWIM4Q9H7M6 989 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 UBN1Q9NPG3 1134 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 CDH7Q9ULB5 785 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 GIT1Q9Y2X7 761 aa16.49■□□□□ 0.23
USB1-214ENST00000568848 ZFHX4Q86UP3 3567 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 LRRIQ4A6NIV6 560 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 PAPLNO95428 1278 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 CTDNEP1O95476 244 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 TARSP26639 723 aaKnown RBP16.48■□□□□ 0.23
USB1-214ENST00000568848 PSMA5P28066 241 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 STARD6P59095 220 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 GRIK3Q13003 919 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 MLF2Q15773 248 aaPredicted RBP16.48■□□□□ 0.23
USB1-214ENST00000568848 LPAL2Q16609 132 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 SLC5A9Q2M3M2 681 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 SLC44A4Q53GD3 710 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 PPM1LQ5SGD2 360 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 EEF1DP3Q658K8 133 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
USB1-214ENST00000568848 OTUD6AQ7L8S5 288 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 NOSTRINQ8IVI9 506 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 TMEM130Q8N3G9 435 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 RHOBTB2Q9BYZ6 727 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.48■□□□□ 0.23
USB1-214ENST00000568848 FNIP2Q9P278 1114 aa16.48■□□□□ 0.23
USB1-214ENST00000568848 DNMT3BQ9UBC3 853 aaKnown RBP16.48■□□□□ 0.23
USB1-214ENST00000568848 KANSL1LA0AUZ9 987 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 SHISA7A6NL88 538 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 FAM170BA6NMN3 283 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 ASAP2O43150 1006 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 NR1I2O75469 434 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 RECQL4O94761 1208 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 RARRES1P49788 294 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 NAB2Q15742 525 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 PPP4R3AQ6IN85 833 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 SLC27A1Q6PCB7 646 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 CYP26C1Q6V0L0 522 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 IFNLR1Q8IU57 520 aaPredicted RBP16.47■□□□□ 0.23
USB1-214ENST00000568848 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 CCDC51Q96ER9 411 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 MCRS1Q96EZ8 462 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 KIFC3Q9BVG8 833 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 PDZD7Q9H5P4 517 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 GOLGA2P5Q9HBQ8 144 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 DLL3Q9NYJ7 618 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 STK39Q9UEW8 545 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 CHD8Q9HCK8 2581 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
USB1-214ENST00000568848 MAP1BP46821 2468 aaKnown RBP16.46■□□□□ 0.23
USB1-214ENST00000568848 KMT2BQ9UMN6 2715 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms