RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	TRAPPC3	O43617	180 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	CLASP2	O75122	1294 aa	Known RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	PLCG1	P19174	1290 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	DDIT3	P35638	169 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	AFF1	P51825	1210 aa	Known RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	DSC1	Q08554	894 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	KARS	Q15046	597 aa	Known RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	STK38	Q15208	465 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	TMEM119	Q4V9L6	283 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	ATAT1	Q5SQI0	421 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	RRAGB	Q5VZM2	374 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	PDXDC1	Q6P996	788 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	CCDC73	Q6ZRK6	1079 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	KCNK18	Q7Z418	384 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	ZBTB33	Q86T24	672 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	TMEM173	Q86WV6	379 aa	Predicted RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	RIPOR3	Q96MK2	946 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	NECTIN4	Q96NY8	510 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	ACAP3	Q96P50	834 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	ACO2	Q99798	780 aa	Known RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	PHF7	Q9BWX1	381 aa	Predicted RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	PARVG	Q9HBI0	331 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	MIOS	Q9NXC5	875 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	ARHGAP28	Q9P2N2	729 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	STK17A	Q9UEE5	414 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	NR2E1	Q9Y466	385 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	USP15	Q9Y4E8	981 aa	Predicted RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	SRPRB	Q9Y5M8	271 aa	Known RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	HCFC2	Q9Y5Z7	792 aa		11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.37	□□□□□ -0.59
UBR1-207	ENST00000568782	CUL9	Q8IWT3	2517 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	TOM1L1	O75674	476 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	GLP2R	O95838	553 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	MCF2	P10911	925 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	HARS	P12081	509 aa	Known RBP	11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	GRM5	P41594	1212 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	MTHFR	P42898	656 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	LIG4	P49917	911 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	OSTN	P61366	133 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	ZP2	Q05996	745 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	REST	Q13127	1097 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	CBX2	Q14781	532 aa	Predicted RBP	11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	PTPN14	Q15678	1187 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	KYAT1	Q16773	422 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	NT5DC1	Q5TFE4	455 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	FUT10	Q6P4F1	479 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	MPZL3	Q6UWV2	235 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	SV2B	Q7L1I2	683 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	AUTS2	Q8WXX7	1259 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	RAD54L	Q92698	747 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	UROC1	Q96N76	676 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	HERC2P3	Q9BVR0	1158 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	TARS2	Q9BW92	718 aa	Known RBP	11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	APOL5	Q9BWW9	433 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	LRRC27	Q9C0I9	530 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	ANKFY1	Q9P2R3	1169 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	MTMR6	Q9Y217	621 aa		11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.36	□□□□□ -0.59
UBR1-207	ENST00000568782	VCAN	P13611	3396 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	CASTOR2	A6NHX0	329 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	TTLL13P	A6NNM8	815 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782		K7ENM7	598 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	TRAK2	O60296	914 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	STAT6	P42226	847 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	MCM6	Q14566	821 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	SLC39A14	Q15043	492 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	EEF1DP3	Q658K8	133 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	ZPBP2	Q6X784	338 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	HAUS6	Q7Z4H7	955 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	CEP57	Q86XR8	500 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	GPR65	Q8IYL9	337 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	DAW1	Q8N136	415 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	TMEM161B	Q8NDZ6	487 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	DDX27	Q96GQ7	796 aa	Known RBP	11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	EPSTI1	Q96J88	318 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	RPGRIP1	Q96KN7	1286 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	KLHL5	Q96PQ7	755 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	REEP2	Q9BRK0	252 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	ADAM7	Q9H2U9	754 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	SFXN1	Q9H9B4	322 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	USP20	Q9Y2K6	914 aa		11.35	□□□□□ -0.59
UBR1-207	ENST00000568782	PI4K2B	G5E9Z4	385 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	HNRNPDL	O14979	420 aa	Known RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	XPOT	O43592	962 aa	Known RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	DCX	O43602	365 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	B3GAT3	O94766	335 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	GLUD1	P00367	558 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	CNP	P09543	421 aa	Known RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	MAPT	P10636	758 aa	Known RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	NCKAP1L	P55160	1127 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	RBM10	P98175	930 aa	Known RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	AMPD3	Q01432	767 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	DSG1	Q02413	1049 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	CACNB1	Q02641	598 aa	Predicted RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	MAPK7	Q13164	816 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	KCNC3	Q14003	757 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	PTPA	Q15257	358 aa		11.34	□□□□□ -0.59

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