RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ZBTB39O15060 712 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 POU2F2P09086 479 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 TUSC3Q13454 348 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 PJA1Q8NG27 643 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 PIK3R5Q8WYR1 880 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 TTPALQ9BTX7 342 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 PRMT7Q9NVM4 692 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 PARP2Q9UGN5 583 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 CDH7Q9ULB5 785 aa17.46■□□□□ 0.39
HERPUD1-215ENST00000568676 DOCK8Q8NF50 2099 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 XYLBO75191 536 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 NPTXRO95502 500 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 SP9P0CG40 484 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 GLRA2P23416 452 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 AKAP5P24588 427 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 MAGEA9P43362 315 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 RARRES1P49788 294 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 PFKPQ01813 784 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 PRKCQQ04759 706 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 SCRN1Q12765 414 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 ZNF528Q3MIS6 628 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 SPECC1Q5M775 1068 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 RSPO2Q6UXX9 243 aaPredicted RBP17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 ASAP3Q8TDY4 903 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 RUBCNQ92622 972 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 B3GALT6Q96L58 329 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 OSBPL6Q9BZF3 934 aa17.45■□□□□ 0.38
HERPUD1-215ENST00000568676 DCHS1Q96JQ0 3298 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 DCNP07585 359 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 MYBP10242 640 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 KRT2P35908 639 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 PUM1Q14671 1186 aaKnown RBP eCLIP17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 CALCRLQ16602 461 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 FAM187BQ17R55 369 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 RTP2Q5QGT7 225 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 PPM1LQ5SGD2 360 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 GLYCTKQ8IVS8 523 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 ZBTB8OSQ8IWT0 167 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 MCPH1Q8NEM0 835 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 OXER1Q8TDS5 423 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 C2orf40Q9H1Z8 148 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 TTC12Q9H892 705 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 FBXO4Q9UKT5 387 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 R4GN57 208 aa17.44■□□□□ 0.38
HERPUD1-215ENST00000568676 KANSL1LA0AUZ9 987 aa17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 B4GALT5O43286 388 aa17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 PFKFB2O60825 505 aa17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 THP07101 528 aa17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 PSMD5Q16401 504 aa17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 GRASPQ7Z6J2 395 aaPredicted RBP17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 HINFPQ9BQA5 517 aa17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 LARP6Q9BRS8 491 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 DDX23Q9BUQ8 820 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 BCO2Q9BYV7 579 aa17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 POLR3FQ9H1D9 316 aaPredicted RBP17.43■□□□□ 0.38
HERPUD1-215ENST00000568676 CACNA1AO00555 2505 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 LRRIQ4A6NIV6 560 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 N4BP3O15049 544 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 SPTLC1O15269 473 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 KINO60870 393 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 C8AP07357 584 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 RPL17P18621 184 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 GPC5P78333 572 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 ANKRD1Q15327 319 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 FAM171A1Q5VUB5 890 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 CDCA2Q69YH5 1023 aaPredicted RBP17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 PRSS55Q6UWB4 352 aaPredicted RBP17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 DGLUCYQ7Z3D6 616 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 LNX1Q8TBB1 728 aaPredicted RBP17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 FGF13Q92913 245 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 FGF14Q92915 247 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 RMDN1Q96DB5 314 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 CLSTN3Q9BQT9 956 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 ADPGKQ9BRR6 497 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 FZD8Q9H461 694 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 KLK14Q9P0G3 267 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 ORC3Q9UBD5 711 aaPredicted RBP17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 KCNH3Q9ULD8 1083 aa17.42■□□□□ 0.38
HERPUD1-215ENST00000568676 NEMFO60524 1076 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 MLF2Q15773 248 aaPredicted RBP17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 EARS2Q5JPH6 523 aaKnown RBP17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 POTEGQ6S5H5 508 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 PARM1Q6UWI2 310 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 CEP57Q86XR8 500 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 KIAA2013Q8IYS2 634 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 GPR161Q8N6U8 529 aaKnown RBP17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 TNFRSF25Q93038 417 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 NELL2Q99435 816 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 TUFT1Q9NNX1 390 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 ZNF292O60281 2723 aa17.41■□□□□ 0.38
HERPUD1-215ENST00000568676 TMEM189-UBE2V1I3L0A0 370 aa17.4■□□□□ 0.38
HERPUD1-215ENST00000568676 LAMTOR5O43504 91 aa17.4■□□□□ 0.38
HERPUD1-215ENST00000568676 USO1O60763 962 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-215ENST00000568676 KIF4AO95239 1232 aa17.4■□□□□ 0.38
HERPUD1-215ENST00000568676 SDHBP21912 280 aa17.4■□□□□ 0.38
HERPUD1-215ENST00000568676 RBM25P49756 843 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-215ENST00000568676 NR5A1Q13285 461 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms