RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	ZNF598	Q86UK7	904 aa	Known RBP	13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	THNSL1	Q8IYQ7	743 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	SMG8	Q8ND04	991 aa	Known RBP	13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	PHOSPHO2	Q8TCD6	241 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	CEP63	Q96MT8	703 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	ACAP3	Q96P50	834 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	UBE2O	Q9C0C9	1292 aa	Known RBP	13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	HAPLN2	Q9GZV7	340 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	IKZF4	Q9H2S9	585 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	DMAC2	Q9NW81	257 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	CPSF3	Q9UKF6	684 aa	Known RBP	13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	FRMD4B	Q9Y2L6	1034 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	GIT1	Q9Y2X7	761 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	PCDHB7	Q9Y5E2	793 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	SLC4A7	Q9Y6M7	1214 aa		13.08	□□□□□ -0.32
FANCA-231	ENST00000568626	TRIM49B	A6NDI0	452 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	CLIC2	O15247	247 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	RECQL4	O94761	1208 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	ATF7	P17544	494 aa	Predicted RBP	13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	ZNF445	P59923	1031 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	ENPEP	Q07075	957 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	ADAM9	Q13443	819 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	SURF1	Q15526	300 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	SNRNP35	Q16560	246 aa	Known RBP	13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	ANKRD40	Q6AI12	368 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	LRSAM1	Q6UWE0	723 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	GLB1L	Q6UWU2	654 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	LRRC55	Q6ZSA7	311 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	BRSK2	Q8IWQ3	736 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	CD302	Q8IX05	232 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	CSGALNACT2	Q8N6G5	542 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	CEP120	Q8N960	986 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	ENOX1	Q8TC92	643 aa	Known RBP	13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	NOC3L	Q8WTT2	800 aa	Known RBP	13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	TOP1MT	Q969P6	601 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	RNPC3	Q96LT9	517 aa	Known RBP	13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	TSPAN18	Q96SJ8	248 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	DNAJC25	Q9H1X3	360 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	RSAD1	Q9HA92	442 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	PLEKHA5	Q9HAU0	1116 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	SNTG2	Q9NY99	539 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	COL4A6	Q14031	1691 aa		13.07	□□□□□ -0.32
FANCA-231	ENST00000568626	CIT	O14578	2027 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	ZNF233	A6NK53	670 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	INPPL1	O15357	1258 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	IL18RAP	O95256	599 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	GNA14	O95837	355 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	EPB41	P11171	864 aa	Known RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	PSMC2	P35998	433 aa	Known RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	PMS1	P54277	932 aa	Known RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	STX17	P56962	302 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	MYL5	Q02045	173 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	PPP2R3A	Q06190	1150 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	TPD52L1	Q16890	204 aa	Predicted RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	INTS8	Q75QN2	995 aa	Known RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	FAM114A1	Q8IWE2	563 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	ABI1	Q8IZP0	508 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	CRIPAK	Q8N1N5	446 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	RNF169	Q8NCN4	708 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	SAAL1	Q96ER3	474 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	SNX27	Q96L92	541 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	RPS6KC1	Q96S38	1066 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	FAM213A	Q9BRX8	229 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	MRPL9	Q9BYD2	267 aa	Known RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	GZF1	Q9H116	711 aa	Predicted RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	PRO3102	Q9H379	93 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	PCIF1	Q9H4Z3	704 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	RPF1	Q9H9Y2	349 aa	Known RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	RBAK	Q9NYW8	714 aa	Predicted RBP	13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	HES2	Q9Y543	173 aa		13.06	□□□□□ -0.32
FANCA-231	ENST00000568626	IKBKB	O14920	756 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	CXCL8	P10145	99 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	ACOT2	P49753	483 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	ZNF165	P49910	485 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	OSTN	P61366	133 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	DEFB103A	P81534	67 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	ENOX2	Q16206	610 aa	Known RBP	13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	SPATA1	Q5VX52	437 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	CEP135	Q66GS9	1140 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	AGMO	Q6ZNB7	445 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	NT5DC4	Q86YG4	428 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	CBWD2	Q8IUF1	395 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	FAM186B	Q8IYM0	893 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	URGCP	Q8TCY9	931 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	DUSP9	Q99956	384 aa	Known RBP	13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	APOL6	Q9BWW8	343 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	TMEM117	Q9H0C3	514 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	TSPY26P	Q9H489	355 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	THAP9	Q9H5L6	903 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	ASB7	Q9H672	318 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	METTL14	Q9HCE5	456 aa	Known RBP	13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	KANSL3	Q9P2N6	904 aa		13.05	□□□□□ -0.32
FANCA-231	ENST00000568626	PARP2	Q9UGN5	583 aa		13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms