RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 SERTAD1Q9UHV2 236 aa9.25□□□□□ -0.93
TSC2-223ENST00000568566 FBXL21Q9UKT6 434 aa9.25□□□□□ -0.93
TSC2-223ENST00000568566 DNM3Q9UQ16 869 aa9.25□□□□□ -0.93
TSC2-223ENST00000568566 GPR179Q6PRD1 2367 aa9.25□□□□□ -0.93
TSC2-223ENST00000568566 ACACBO00763 2458 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 SPDYE4A6NLX3 237 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 MAGEB2O15479 319 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 POLR2DO15514 142 aaKnown RBP9.24□□□□□ -0.93
TSC2-223ENST00000568566 B4GALT5O43286 388 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 ZC3H11AO75152 810 aaKnown RBP eCLIP9.24□□□□□ -0.93
TSC2-223ENST00000568566 CXCL14O95715 111 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 PRR29P0C7W0 189 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
TSC2-223ENST00000568566 NPR3P17342 541 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 AOC1P19801 751 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 ALDH7A1P49419 539 aaKnown RBP9.24□□□□□ -0.93
TSC2-223ENST00000568566 BCAR1P56945 870 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 GIT2Q14161 759 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 LONRF3Q496Y0 759 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 RRAGBQ5VZM2 374 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 HAUS3Q68CZ6 603 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 ATL3Q6DD88 541 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 DYMQ7RTS9 669 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 SIX5Q8N196 739 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 FSIP1Q8NA03 581 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 GLIS3Q8NEA6 775 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 KCNG4Q8TDN1 519 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 ERCC4Q92889 916 aaPredicted RBP9.24□□□□□ -0.93
TSC2-223ENST00000568566 TMEM169Q96HH4 297 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 CDK5RAP3Q96JB5 506 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 MAP7D2Q96T17 732 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 REEP2Q9BRK0 252 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 ZBP1Q9H171 429 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 BLZF1Q9H2G9 400 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 CFAP45Q9UL16 551 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 HPSEQ9Y251 543 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 USTQ9Y2C2 406 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 COL4A3BPQ9Y5P4 624 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 TCHHQ07283 1943 aa9.24□□□□□ -0.93
TSC2-223ENST00000568566 C2orf16Q68DN1 1984 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 MED19A0JLT2 244 aaPredicted RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 ACTN4O43707 911 aaKnown RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 DKC1O60832 514 aaKnown RBP eCLIP9.23□□□□□ -0.932e-6■■■□□ 18.5
TSC2-223ENST00000568566 PDIA4P13667 645 aaKnown RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 DARSP14868 501 aaKnown RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 EIF4BP23588 611 aaKnown RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 CMA1P23946 247 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 RFC5P40937 340 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 AFMP43652 599 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 BMS1Q14692 1282 aaKnown RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 ADALQ6DHV7 355 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 CCDC149Q6ZUS6 474 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 ZNF598Q86UK7 904 aaKnown RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 PLCD3Q8N3E9 789 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 DTWD2Q8NBA8 298 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 RNF149Q8NC42 400 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 ENGASEQ8NFI3 743 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 RASSF8Q8NHQ8 419 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 BCL7CQ8WUZ0 217 aaPredicted RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 LARP4BQ92615 738 aaKnown RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 ACSF2Q96CM8 615 aaPredicted RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 DNAJC19Q96DA6 116 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 RMDN1Q96DB5 314 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 CALML4Q96GE6 196 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 MRPL9Q9BYD2 267 aaKnown RBP9.23□□□□□ -0.93
TSC2-223ENST00000568566 RAB34Q9BZG1 259 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 CXCL16Q9H2A7 254 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 SFXN1Q9H9B4 322 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 TBC1D7Q9P0N9 293 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 KCNH3Q9ULD8 1083 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 ARID2Q68CP9 1835 aa9.23□□□□□ -0.93
TSC2-223ENST00000568566 A0A0U1RQF3 1178 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 MEIS3P2A8K0S8 358 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 SLC16A4O15374 487 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 NARSO43776 548 aaKnown RBP9.22□□□□□ -0.93
TSC2-223ENST00000568566 PRPF40AO75400 957 aaKnown RBP9.22□□□□□ -0.93
TSC2-223ENST00000568566 DGAT1O75907 488 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 MUTP22033 750 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 RFX1P22670 979 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 NMT1P30419 496 aaKnown RBP9.22□□□□□ -0.93
TSC2-223ENST00000568566 HOXA11P31270 313 aaPredicted RBP9.22□□□□□ -0.93
TSC2-223ENST00000568566 STAT6P42226 847 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 PEX3P56589 373 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 TDGQ13569 410 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 SNW1Q13573 536 aaKnown RBP9.22□□□□□ -0.93
TSC2-223ENST00000568566 CUL4BQ13620 913 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 AMHR2Q16671 573 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 EEF1DP3Q658K8 133 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 OTOP3Q7RTS5 596 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 KIAA2013Q8IYS2 634 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 TMEM130Q8N3G9 435 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 SLC22A17Q8WUG5 538 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 NLRP7Q8WX94 980 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 SLC7A3Q8WY07 619 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 RIN2Q8WYP3 895 aaPredicted RBP9.22□□□□□ -0.93
TSC2-223ENST00000568566 LPPQ93052 612 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 CPB2Q96IY4 423 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 CCDC43Q96MW1 224 aaKnown RBP9.22□□□□□ -0.93
TSC2-223ENST00000568566 FIZ1Q96SL8 496 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms