RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 KCNN1Q92952 543 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 MRPL38Q96DV4 380 aaKnown RBP14.25□□□□□ -0.13
CNOT1-213ENST00000568158 PAGE5Q96GU1 130 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 STRA6Q9BX79 667 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 ST6GALNAC4Q9H4F1 302 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 PRDM6Q9NQX0 595 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 SPG21Q9NZD8 308 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 SEL1LQ9UBV2 794 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 COL4A4P53420 1690 aaPredicted RBP14.25□□□□□ -0.13
CNOT1-213ENST00000568158 PLXNA4Q9HCM2 1894 aa14.25□□□□□ -0.13
CNOT1-213ENST00000568158 TDRD15B5MCY1 1934 aaKnown RBP14.24□□□□□ -0.13
CNOT1-213ENST00000568158 TISP43B9A030 160 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 NRP1O14786 923 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 CLDN3O15551 220 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 PPP1R37O75864 691 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 PRPF6O94906 941 aaKnown RBP14.24□□□□□ -0.13
CNOT1-213ENST00000568158 GCNT3O95395 438 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 MCF2P10911 925 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 IRS1P35568 1242 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 GRM5P41594 1212 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 LIG4P49917 911 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 CASP5P51878 434 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 ERVFC1P60507 584 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 COASYQ13057 564 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 PTPROQ16827 1216 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 SLC39A4Q6P5W5 647 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 TMEM173Q86WV6 379 aaPredicted RBP14.24□□□□□ -0.13
CNOT1-213ENST00000568158 COLGALT2Q8IYK4 626 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 GLIS3Q8NEA6 775 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 MRPS27Q92552 414 aaKnown RBP14.24□□□□□ -0.13
CNOT1-213ENST00000568158 RABGGTAQ92696 567 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 PYM1Q9BRP8 204 aaKnown RBP14.24□□□□□ -0.13
CNOT1-213ENST00000568158 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 ANKFY1Q9P2R3 1169 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 FAN1Q9Y2M0 1017 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 PCDHGC5Q9Y5F6 944 aa14.24□□□□□ -0.13
CNOT1-213ENST00000568158 CDH23Q9H251 3354 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 PTGESO14684 152 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 ZNF202O95125 648 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 PIGRP01833 764 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 OR1G1P47890 313 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 PLCB3Q01970 1234 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 MCL1Q07820 350 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 CSPP1Q1MSJ5 1256 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 APBB1IPQ7Z5R6 666 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-213ENST00000568158 MAP4K3Q8IVH8 894 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 MICAL1Q8TDZ2 1067 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 BCL7CQ8WUZ0 217 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-213ENST00000568158 RSPH1Q8WYR4 309 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 ACAP3Q96P50 834 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 RPS6KC1Q96S38 1066 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 CCDC94Q9BW85 323 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-213ENST00000568158 LMAN2LQ9H0V9 348 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 MAGEF1Q9HAY2 307 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 OLFML3Q9NRN5 406 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 CACNG4Q9UBN1 327 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 PCDHB13Q9Y5F0 798 aa14.23□□□□□ -0.13
CNOT1-213ENST00000568158 TRANK1O15050 2925 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 HNRNPDLO14979 420 aaKnown RBP14.22□□□□□ -0.13
CNOT1-213ENST00000568158 MEFVO15553 781 aaPredicted RBP14.22□□□□□ -0.13
CNOT1-213ENST00000568158 KLRC4O43908 158 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 GABBR2O75899 941 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 THP07101 528 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 SCP2P22307 547 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 TNFSF9P41273 254 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 KRT17Q04695 432 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 DSC1Q08554 894 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 NOLC1Q14978 699 aaKnown RBP eCLIP14.22□□□□□ -0.13
CNOT1-213ENST00000568158 SLC10A6Q3KNW5 377 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 TCEAL5Q5H9L2 206 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 GLRA4Q5JXX5 417 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 ZBTB41Q5SVQ8 909 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
CNOT1-213ENST00000568158 ALKAL1Q6UXT8 129 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 UNC13DQ70J99 1090 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 SLC17A8Q8NDX2 589 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 IGSF21Q96ID5 467 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 ACCSQ96QU6 501 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 TMEM175Q9BSA9 504 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 USP25Q9UHP3 1055 aa14.22□□□□□ -0.13
CNOT1-213ENST00000568158 PUF60Q9UHX1 559 aaKnown RBP14.22□□□□□ -0.13
CNOT1-213ENST00000568158 PRG3Q9Y2Y8 225 aaPredicted RBP14.22□□□□□ -0.13
CNOT1-213ENST00000568158 A0A0B4J269 797 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 SMIM28A0A1B0GU29 152 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 PVALEFA0A1B0GWK0 134 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 F8W810 466 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 GADD45BO75293 160 aaPredicted RBP14.21□□□□□ -0.13
CNOT1-213ENST00000568158 PRR29P0C7W0 189 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 ABCD1P33897 745 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 PPM1AP35813 382 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 YARSP54577 528 aaKnown RBP14.21□□□□□ -0.13
CNOT1-213ENST00000568158 UBE3AQ05086 875 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 GRIK3Q13003 919 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 SKIV2LQ15477 1246 aaKnown RBP14.21□□□□□ -0.13
CNOT1-213ENST00000568158 NAB2Q15742 525 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 XKR4Q5GH76 650 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 KRBA2Q6ZNG9 492 aa14.21□□□□□ -0.13
CNOT1-213ENST00000568158 TAS1R1Q7RTX1 841 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms