RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 AGO2Q9UKV8 859 aaKnown RBP19.64■□□□□ 0.73
COMMD4-222ENST00000568034 TRAF3IP3Q9Y228 551 aa19.64■□□□□ 0.73
COMMD4-222ENST00000568034 PDXKO00764 312 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 CLIC2O15247 247 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 HOXA2O43364 376 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 TLL1O43897 1013 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 KIF20AO95235 890 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 LINC00271P0C7V0 271 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 MATR3P43243 847 aaKnown RBP eCLIP19.63■□□□□ 0.73
COMMD4-222ENST00000568034 PMS1P54277 932 aaKnown RBP19.63■□□□□ 0.73
COMMD4-222ENST00000568034 SMAD3P84022 425 aaKnown RBP19.63■□□□□ 0.73
COMMD4-222ENST00000568034 CENPPQ6IPU0 288 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 HS2ST1Q7LGA3 356 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 CMTR2Q8IYT2 770 aaKnown RBP19.63■□□□□ 0.73
COMMD4-222ENST00000568034 HACE1Q8IYU2 909 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 TMEM174Q8WUU8 243 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 SAAL1Q96ER3 474 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 SNX27Q96L92 541 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 ZFP42Q96MM3 310 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 YME1L1Q96TA2 773 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 GAD1Q99259 594 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 CCDC94Q9BW85 323 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-222ENST00000568034 PCIF1Q9H4Z3 704 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 UBN1Q9NPG3 1134 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 DMAC2Q9NW81 257 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 MIOSQ9NXC5 875 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 HSPBP1Q9NZL4 362 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 KLK14Q9P0G3 267 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 CGNQ9P2M7 1197 aaKnown RBP19.63■□□□□ 0.73
COMMD4-222ENST00000568034 HCSTQ9UBK5 93 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 PARP2Q9UGN5 583 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 INSL6Q9Y581 213 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 PCDHA11Q9Y5I1 949 aa19.63■□□□□ 0.73
COMMD4-222ENST00000568034 RALGAPA2Q2PPJ7 1873 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 TBKBP1A7MCY6 615 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 CXCL8P10145 99 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 ACOT2P49753 483 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 ENOX2Q16206 610 aaKnown RBP19.62■□□□□ 0.73
COMMD4-222ENST00000568034 NFIL3Q16649 462 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 SLC10A6Q3KNW5 377 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 PAN2Q504Q3 1202 aaKnown RBP19.62■□□□□ 0.73
COMMD4-222ENST00000568034 XKR4Q5GH76 650 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 GLB1LQ6UWU2 654 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 ALKAL1Q6UXT8 129 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 LRRC55Q6ZSA7 311 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 GOLGA5Q8TBA6 731 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 FBXL18Q96ME1 805 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 ZBED2Q9BTP6 218 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 PLAGL2Q9UPG8 496 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 CITO14578 2027 aa19.62■□□□□ 0.73
COMMD4-222ENST00000568034 LAMA2P24043 3122 aaKnown RBP19.62■□□□□ 0.73
COMMD4-222ENST00000568034 TRIP11Q15643 1979 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 GOLGA8IPA6NC78 632 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 ARL5CA6NH57 179 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 GOLGA8JA6NMD2 632 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 SOX1O00570 391 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-222ENST00000568034 PTGESO14684 152 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 B4GALT3O60512 393 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 ADRB2P07550 413 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 CLTAP09496 248 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 WNT7BP56706 349 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 NLRP12P59046 1061 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 KYAT1Q16773 422 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 DPCR1Q3MIW9 517 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 NOMO2Q5JPE7 1267 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 SLC9A9Q8IVB4 645 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 P2RX5Q93086 422 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 DHTKD1Q96HY7 919 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-222ENST00000568034 ACAP3Q96P50 834 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 INPP5FQ9Y2H2 1132 aa19.61■□□□□ 0.73
COMMD4-222ENST00000568034 ANK1P16157 1881 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 TTC26A0AVF1 554 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 TRIM49BA6NDI0 452 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 KIAA0391O15091 583 aaKnown RBP19.6■□□□□ 0.73
COMMD4-222ENST00000568034 CALUO43852 315 aaPredicted RBP19.6■□□□□ 0.73
COMMD4-222ENST00000568034 EXTL3O43909 919 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 NR3C1P04150 777 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 CCNE1P24864 410 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 PPP1R2P41236 205 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 SCNN1GP51170 649 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 CYP2J2P51589 502 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 HABP4Q5JVS0 413 aaKnown RBP19.6■□□□□ 0.73
COMMD4-222ENST00000568034 SPRED2Q7Z698 418 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 CBWD2Q8IUF1 395 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 BRSK2Q8IWQ3 736 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 ZC3H3Q8IXZ2 948 aaKnown RBP19.6■□□□□ 0.73
COMMD4-222ENST00000568034 ABI1Q8IZP0 508 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 GPD1LQ8N335 351 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 RSPH1Q8WYR4 309 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 ZMAT2Q96NC0 199 aaKnown RBP19.6■□□□□ 0.73
COMMD4-222ENST00000568034 MED15Q96RN5 788 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 FAM213AQ9BRX8 229 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 CWH43Q9H720 699 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 TBC1D13Q9NVG8 400 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 CNTN3Q9P232 1028 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 MRPL42Q9Y6G3 142 aaKnown RBP19.6■□□□□ 0.73
COMMD4-222ENST00000568034 PDCD11Q14690 1871 aaKnown RBP19.6■□□□□ 0.73
COMMD4-222ENST00000568034 KIAA1671Q9BY89 1806 aa19.6■□□□□ 0.73
COMMD4-222ENST00000568034 LINC01553A4QN01 128 aa19.59■□□□□ 0.73
COMMD4-222ENST00000568034 PSMA7O14818 248 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms