RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 KATNBL1Q9H079 304 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 C2orf40Q9H1Z8 148 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 USP20Q9Y2K6 914 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 STYXL1Q9Y6J8 313 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 COL1A2P08123 1366 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 K7ERI5 159 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 ASAP2O43150 1006 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 KRT86O43790 486 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 GFPT2O94808 682 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 LDHAP00338 332 aaKnown RBP15.85■□□□□ 0.13
COMMD4-221ENST00000567935 CASQ1P31415 396 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 LIG4P49917 911 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 KIF11P52732 1056 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 PLCB4Q15147 1175 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 SNRNP35Q16560 246 aaKnown RBP15.85■□□□□ 0.13
COMMD4-221ENST00000567935 AAK1Q2M2I8 961 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 RASIP1Q5U651 963 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 DPY19L2P1Q6NXN4 242 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 C16orf59Q7L2K0 433 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 KIAA1328Q86T90 577 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 GPD1LQ8N335 351 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 ACRBPQ8NEB7 543 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 ASAP3Q8TDY4 903 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 POMGNT1Q8WZA1 660 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 BICD1Q96G01 975 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 TINF2Q9BSI4 451 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 IKZF4Q9H2S9 585 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 NKX2-4Q9H2Z4 354 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 L2HGDHQ9H9P8 463 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 NLRC4Q9NPP4 1024 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 TMEM39AQ9NV64 488 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 ARHGAP20Q9P2F6 1191 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 DNAI1Q9UI46 699 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 ZNF215Q9UL58 517 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-221ENST00000567935 ATP8B3O60423 1300 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 ADGRA3Q8IWK6 1321 aa15.85■□□□□ 0.13
COMMD4-221ENST00000567935 UQCRHLA0A096LP55 91 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 LRRIQ4A6NIV6 560 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 RBAK-RBAKDNI3L0D1 243 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 DYNC1I1O14576 645 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 RIOK3O14730 519 aaKnown RBP15.84■□□□□ 0.13
COMMD4-221ENST00000567935 MAGEB2O15479 319 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 SEPT4O43236 478 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 AKR1B10O60218 316 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 PPFIA4O75335 1185 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 SNAI1O95863 264 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-221ENST00000567935 UQCRHP07919 91 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 HOXD8P13378 290 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-221ENST00000567935 FERP16591 822 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 SLC9A1P19634 815 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 ADSSP30520 456 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 PRKCIP41743 596 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 VAV2P52735 878 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 RAPGEF1Q13905 1077 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 TFDP1Q14186 410 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 TMEM240Q5SV17 173 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 ZPBP2Q6X784 338 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 ZBTB8OSQ8IWT0 167 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 TMEM143Q96AN5 459 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 MFSD14AQ96MC6 490 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 KIFC3Q9BVG8 833 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 PCIF1Q9H4Z3 704 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 SIX2Q9NPC8 291 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 LZTFL1Q9NQ48 299 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 PDGFCQ9NRA1 345 aa15.84■□□□□ 0.13
COMMD4-221ENST00000567935 REXO2Q9Y3B8 237 aaKnown RBP15.84■□□□□ 0.13
COMMD4-221ENST00000567935 ZNF233A6NK53 670 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 ANKRD63C9JTQ0 380 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 EXTL3O43909 919 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 EIF4A3P38919 411 aaKnown RBP15.83■□□□□ 0.12
COMMD4-221ENST00000567935 STAT1P42224 750 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 ARHGAP25P42331 645 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 JAM2P57087 298 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 POU5F1BQ06416 359 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 FAAP100Q0VG06 881 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 KIF5AQ12840 1032 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 ACVR2BQ13705 512 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 ASTE1Q2TB18 679 aaPredicted RBP15.83■□□□□ 0.12
COMMD4-221ENST00000567935 DUSP28Q4G0W2 176 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 TDRD12Q587J7 1177 aaKnown RBP15.83■□□□□ 0.12
COMMD4-221ENST00000567935 C10orf76Q5T2E6 689 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 HGSNATQ68CP4 663 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 CDCA2Q69YH5 1023 aaPredicted RBP15.83■□□□□ 0.12
COMMD4-221ENST00000567935 TAS1R3Q7RTX0 852 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 VPS36Q86VN1 386 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 JAKMIP2Q96AA8 810 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 FAM81BQ96LP2 452 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 STK33Q9BYT3 514 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 INTS2Q9H0H0 1204 aaKnown RBP15.83■□□□□ 0.12
COMMD4-221ENST00000567935 APEX2Q9UBZ4 518 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 PHF24Q9UPV7 400 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 TRPC6Q9Y210 931 aa15.83■□□□□ 0.12
COMMD4-221ENST00000567935 LGALS2P05162 132 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 MXI1P50539 228 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 CYP24A1Q07973 514 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 KLHL30Q0D2K2 578 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 CAPSQ13938 189 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 SKIV2LQ15477 1246 aaKnown RBP15.82■□□□□ 0.12
COMMD4-221ENST00000567935 CBWD6Q4V339 395 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 CBWD3Q5JTY5 395 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms