RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RPS6KC1Q96S38 1066 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 GAD1Q99259 594 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 ADPGKQ9BRR6 497 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 MMTAG2Q9BU76 263 aaKnown RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 TIPINQ9BVW5 301 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 APOL6Q9BWW8 343 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 PHF7Q9BWX1 381 aaPredicted RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 VN1R3Q9BXE9 311 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 EMILIN2Q9BXX0 1053 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 NT5C3AQ9H0P0 336 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 S1PR5Q9H228 398 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 PDZD7Q9H5P4 517 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 C17orf75Q9HAS0 396 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 C11orf16Q9NQ32 467 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 MRPL17Q9NRX2 175 aaKnown RBP5.28□□□□□ -1.56
CLK3-219ENST00000567805 DZANK1Q9NVP4 752 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 SSX2IPQ9Y2D8 614 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 VWA8A3KMH1 1905 aa5.28□□□□□ -1.56
CLK3-219ENST00000567805 VWA3AA6NCI4 1184 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 CCDC169A6NNP5 214 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 PRR33A8MZF0 331 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 E9PMD0 336 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 K7ERI5 159 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 SLC26A4O43511 780 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 LILRB3O75022 631 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 HIP1RO75146 1068 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 RECQL4O94761 1208 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 EFEMP2O95967 443 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 BMP15O95972 392 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 URODP06132 367 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 THP07101 528 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 PDCP20941 246 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 GUCY2CP25092 1073 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 CDC25AP30304 524 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 MTHFRP42898 656 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 NPTX2P47972 431 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 GLUD2P49448 558 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 PEX3P56589 373 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 DMP1Q13316 513 aaPredicted RBP5.27□□□□□ -1.57
CLK3-219ENST00000567805 TUSC3Q13454 348 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 CUL4AQ13619 759 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 E2F4Q16254 413 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 DCAF4L1Q3SXM0 396 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 HERC4Q5GLZ8 1057 aaPredicted RBP5.27□□□□□ -1.57
CLK3-219ENST00000567805 ATF7IP2Q5U623 682 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 RINT1Q6NUQ1 792 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 SYCE2Q6PIF2 218 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 C1orf186Q6ZWK4 172 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 CDR2LQ86X02 465 aaPredicted RBP5.27□□□□□ -1.57
CLK3-219ENST00000567805 RNF135Q8IUD6 432 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 RNF168Q8IYW5 571 aaPredicted RBP5.27□□□□□ -1.57
CLK3-219ENST00000567805 DAW1Q8N136 415 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 SYT2Q8N9I0 419 aaPredicted RBP5.27□□□□□ -1.57
CLK3-219ENST00000567805 GSTCDQ8NEC7 633 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 SLC22A17Q8WUG5 538 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 CDK5RAP3Q96JB5 506 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 RIPOR3Q96MK2 946 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 LRFN3Q9BTN0 628 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 KIFC3Q9BVG8 833 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 HERC2P3Q9BVR0 1158 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 COLEC11Q9BWP8 271 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 ADAM7Q9H2U9 754 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 TMEM134Q9H6X4 195 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 KMT5AQ9NQR1 393 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 MARCH5Q9NX47 278 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 MIOSQ9NXC5 875 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 KCND2Q9NZV8 630 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 KLK14Q9P0G3 267 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 ARHGAP28Q9P2N2 729 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 PARP2Q9UGN5 583 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 MUTYHQ9UIF7 546 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 KCNG1Q9UIX4 513 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 ADAM28Q9UKQ2 775 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 PRG3Q9Y2Y8 225 aaPredicted RBP5.27□□□□□ -1.57
CLK3-219ENST00000567805 HCN4Q9Y3Q4 1203 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 NR2E1Q9Y466 385 aa5.27□□□□□ -1.57
CLK3-219ENST00000567805 RBM19Q9Y4C8 960 aaKnown RBP5.27□□□□□ -1.57
CLK3-219ENST00000567805 SF3B1O75533 1304 aaKnown RBP eCLIP5.26□□□□□ -1.57
CLK3-219ENST00000567805 ANK1P16157 1881 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 VPS37CA5D8V6 355 aaPredicted RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 FAM86C2PA6NEL3 165 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 C2CD2LO14523 706 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 PTGESO14684 152 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 C1RP00736 705 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 EDN1P05305 212 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 SSBP05455 408 aaKnown RBP eCLIP5.26□□□□□ -1.57
CLK3-219ENST00000567805 ADH1AP07327 375 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 CNPP09543 421 aaKnown RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 NUDT7P0C024 238 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 PLA2G4BP0C869 781 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 EPCAMP16422 314 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 LIG1P18858 919 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 KLRC2P26717 231 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 LONP1P36776 959 aaKnown RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 UBA7P41226 1012 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 CLCN4P51793 760 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 SMTNP53814 917 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 SLC12A3P55017 1021 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 DSG1Q02413 1049 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms