RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 ALCAMQ13740 583 aa18.84■□□□□ 0.61
COMMD4-220ENST00000567720 SPOUT1Q5T280 376 aaKnown RBP18.84■□□□□ 0.61
COMMD4-220ENST00000567720 EPM2AIP1Q7L775 607 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-220ENST00000567720 APBB1IPQ7Z5R6 666 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-220ENST00000567720 MIOSQ9NXC5 875 aa18.84■□□□□ 0.61
COMMD4-220ENST00000567720 PARP2Q9UGN5 583 aa18.84■□□□□ 0.61
COMMD4-220ENST00000567720 PVALEFA0A1B0GWK0 134 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 PTGESO14684 152 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 CLDN3O15551 220 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 MEFVO15553 781 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-220ENST00000567720 ZC3H11AO75152 810 aaKnown RBP eCLIP18.83■□□□□ 0.6
COMMD4-220ENST00000567720 PRPF6O94906 941 aaKnown RBP18.83■□□□□ 0.6
COMMD4-220ENST00000567720 MYL1P05976 194 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 OSTNP61366 133 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 DPYDQ12882 1025 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 SEZ6Q53EL9 994 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 CLEC17AQ6ZS10 378 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 ZNF280BQ86YH2 543 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 TCHPQ9BT92 498 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 C11orf84Q9BUA3 381 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-220ENST00000567720 PLVAPQ9BX97 442 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 GBP3Q9H0R5 595 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 NRDE2Q9H7Z3 1164 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 DNAJB4Q9UDY4 337 aa18.83■□□□□ 0.6
COMMD4-220ENST00000567720 SPTBN5Q9NRC6 3674 aaKnown RBP18.83■□□□□ 0.6
COMMD4-220ENST00000567720 VWA8A3KMH1 1905 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 UBE4BO95155 1302 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 H3BNC9 293 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 EIF3DO15371 548 aaKnown RBP eCLIP18.82■□□□□ 0.6
COMMD4-220ENST00000567720 DDHD2O94830 711 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 FOSL2P15408 326 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 HOXD13P35453 343 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 RNASELQ05823 741 aaKnown RBP18.82■□□□□ 0.6
COMMD4-220ENST00000567720 GRIK3Q13003 919 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 POSTNQ15063 836 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 KMT5BQ4FZB7 885 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 ZBTB41Q5SVQ8 909 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 KCNT2Q6UVM3 1135 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 TMEM173Q86WV6 379 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-220ENST00000567720 THNSL1Q8IYQ7 743 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 KLHL23Q8NBE8 558 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 KIAA0895Q8NCT3 520 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 P2RX5Q93086 422 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 SNX27Q96L92 541 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 ACCSQ96QU6 501 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 RPS6KC1Q96S38 1066 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 GAS2L1Q99501 681 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-220ENST00000567720 EXOC1Q9NV70 894 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 PCDHB13Q9Y5F0 798 aa18.82■□□□□ 0.6
COMMD4-220ENST00000567720 A0A0B4J269 797 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 RPN1P04843 607 aaKnown RBP18.81■□□□□ 0.6
COMMD4-220ENST00000567720 ITGB1P05556 798 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 RB1P06400 928 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 ADSSP30520 456 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 TNFSF9P41273 254 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 MATR3P43243 847 aaKnown RBP eCLIP18.81■□□□□ 0.6
COMMD4-220ENST00000567720 BCAR1P56945 870 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 UBE2HP62256 183 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 DSC1Q08554 894 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 GPM6BQ13491 265 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 PNOCQ13519 176 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 BCL7CQ8WUZ0 217 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-220ENST00000567720 SCFD1Q8WVM8 642 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 ZNF558Q96NG5 402 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 CCDC94Q9BW85 323 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-220ENST00000567720 SLC39A2Q9NP94 309 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 STYXL1Q9Y6J8 313 aa18.81■□□□□ 0.6
COMMD4-220ENST00000567720 BRWD1Q9NSI6 2320 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 TSC2P49815 1807 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 OGTO15294 1046 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 GRM6O15303 877 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 CXCL8P10145 99 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 SLC11A1P49279 550 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 NAB2Q15742 525 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 BMT2Q1RMZ1 405 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 GLRA4Q5JXX5 417 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 STXBP4Q6ZWJ1 553 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 SLC39A11Q8N1S5 342 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 TIGD1Q96MW7 591 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 MSTO1Q9BUK6 570 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 ALG13Q9NP73 1137 aaKnown RBP18.8■□□□□ 0.6
COMMD4-220ENST00000567720 AAASQ9NRG9 546 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 KANSL3Q9P2N6 904 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 CACNG4Q9UBN1 327 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 EXOC7Q9UPT5 735 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 PCDHB12Q9Y5F1 795 aa18.8■□□□□ 0.6
COMMD4-220ENST00000567720 XIRP2A4UGR9 3374 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 NT5C1B-RDH14C9J2C7 533 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 FGF18O76093 207 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 DNAJB1P25685 340 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 STK4Q13043 487 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 KANK3Q6NY19 840 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 COLGALT2Q8IYK4 626 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 ZNF507Q8TCN5 953 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 TOPORSQ9NS56 1045 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-220ENST00000567720 MARCH5Q9NX47 278 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 CNTN3Q9P232 1028 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 MTCH2Q9Y6C9 303 aa18.79■□□□□ 0.6
COMMD4-220ENST00000567720 F8W810 466 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 KINO60870 393 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms