RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PRSS33Q8NF86 280 aa20.53■□□□□ 0.88
LINC01238-205ENST00000567549 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.53■□□□□ 0.88
LINC01238-205ENST00000567549 LRWD1Q9UFC0 647 aa20.53■□□□□ 0.88
LINC01238-205ENST00000567549 GBP2P32456 591 aaPredicted RBP20.52■□□□□ 0.88
LINC01238-205ENST00000567549 CLCN5P51795 746 aa20.52■□□□□ 0.88
LINC01238-205ENST00000567549 POTEGQ6S5H5 508 aa20.52■□□□□ 0.88
LINC01238-205ENST00000567549 SMG7Q92540 1137 aaKnown RBP20.52■□□□□ 0.88
LINC01238-205ENST00000567549 WDR6Q9NNW5 1121 aaKnown RBP20.52■□□□□ 0.88
LINC01238-205ENST00000567549 GPRC5CQ9NQ84 441 aa20.52■□□□□ 0.88
LINC01238-205ENST00000567549 CDH22Q9UJ99 828 aa20.52■□□□□ 0.88
LINC01238-205ENST00000567549 FBXL21Q9UKT6 434 aa20.52■□□□□ 0.88
LINC01238-205ENST00000567549 MTCL1Q9Y4B5 1905 aaKnown RBP20.52■□□□□ 0.88
LINC01238-205ENST00000567549 CLUHO75153 1309 aa20.52■□□□□ 0.87
LINC01238-205ENST00000567549 EFEMP2O95967 443 aa20.51■□□□□ 0.87
LINC01238-205ENST00000567549 ASGR2P07307 311 aa20.51■□□□□ 0.87
LINC01238-205ENST00000567549 IER5LQ5T953 404 aa20.51■□□□□ 0.87
LINC01238-205ENST00000567549 ASTLQ6HA08 431 aaPredicted RBP20.51■□□□□ 0.87
LINC01238-205ENST00000567549 KCTD17Q8N5Z5 321 aa20.51■□□□□ 0.87
LINC01238-205ENST00000567549 RIN2Q8WYP3 895 aaPredicted RBP20.51■□□□□ 0.87
LINC01238-205ENST00000567549 TOPORSQ9NS56 1045 aaPredicted RBP20.51■□□□□ 0.87
LINC01238-205ENST00000567549 MIOSQ9NXC5 875 aa20.51■□□□□ 0.87
LINC01238-205ENST00000567549 KLK14Q9P0G3 267 aa20.51■□□□□ 0.87
LINC01238-205ENST00000567549 ZFP37Q9Y6Q3 630 aaPredicted RBP20.51■□□□□ 0.87
LINC01238-205ENST00000567549 WNT7AO00755 349 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 GALR2O43603 387 aaPredicted RBP20.5■□□□□ 0.87
LINC01238-205ENST00000567549 TRAPPC3O43617 180 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 YARSP54577 528 aaKnown RBP20.5■□□□□ 0.87
LINC01238-205ENST00000567549 LIN9Q5TKA1 542 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 KRT79Q5XKE5 535 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 ATOH1Q92858 354 aaPredicted RBP20.5■□□□□ 0.87
LINC01238-205ENST00000567549 UROC1Q96N76 676 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 TTPALQ9BTX7 342 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 PDZD7Q9H5P4 517 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 DUSP12Q9UNI6 340 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 DNM3Q9UQ16 869 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 C2orf16Q68DN1 1984 aa20.5■□□□□ 0.87
LINC01238-205ENST00000567549 K7ERI5 159 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 ST18O60284 1047 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 LIG1P18858 919 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 RFX1P22670 979 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 VCPP55072 806 aaKnown RBP20.49■□□□□ 0.87
LINC01238-205ENST00000567549 KANK3Q6NY19 840 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 RTL10Q7L3V2 364 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 TAS1R1Q7RTX1 841 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 CDR2LQ86X02 465 aaPredicted RBP20.49■□□□□ 0.87
LINC01238-205ENST00000567549 GSTCDQ8NEC7 633 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 SNX29Q8TEQ0 813 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 DRC1Q96MC2 740 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 RTP3Q9BQQ7 232 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 TIPINQ9BVW5 301 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 GPR62Q9BZJ7 368 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 BHMT2Q9H2M3 363 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 C17orf75Q9HAS0 396 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 KCNK12Q9HB15 430 aa20.49■□□□□ 0.87
LINC01238-205ENST00000567549 TGM5O43548 720 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 RECQL4O94761 1208 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 PAPLNO95428 1278 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 HNRNPA1P09651 372 aaKnown RBP eCLIP20.48■□□□□ 0.87
LINC01238-205ENST00000567549 U2AF2P26368 475 aaKnown RBP eCLIP20.48■□□□□ 0.87
LINC01238-205ENST00000567549 PRPHP41219 470 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 TCF15Q12870 199 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 DMP1Q13316 513 aaPredicted RBP20.48■□□□□ 0.87
LINC01238-205ENST00000567549 PALB2Q86YC2 1186 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 PIK3R5Q8WYR1 880 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 CCDC94Q9BW85 323 aaPredicted RBP20.48■□□□□ 0.87
LINC01238-205ENST00000567549 PRKD2Q9BZL6 878 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 CCDC113Q9H0I3 377 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
LINC01238-205ENST00000567549 SNTG2Q9NY99 539 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 EPS15L1Q9UBC2 864 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 KIAA1024Q9UPX6 916 aa20.48■□□□□ 0.87
LINC01238-205ENST00000567549 RBM19Q9Y4C8 960 aaKnown RBP20.48■□□□□ 0.87
LINC01238-205ENST00000567549 PLXNA3P51805 1871 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 A0A087WWV3 80 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 XYLBO75191 536 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 ST3GAL1Q11201 340 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 ATF7IP2Q5U623 682 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 FAM171A1Q5VUB5 890 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.47■□□□□ 0.87
LINC01238-205ENST00000567549 CEP57Q86XR8 500 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 NT5C3AQ9H0P0 336 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 DDX19AQ9NUU7 478 aaKnown RBP20.47■□□□□ 0.87
LINC01238-205ENST00000567549 SLC38A7Q9NVC3 462 aa20.47■□□□□ 0.87
LINC01238-205ENST00000567549 CASTOR2A6NHX0 329 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 ZMYND10O75800 440 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 HOXA9P31269 272 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 PTGDRQ13258 359 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 PSMD5Q16401 504 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 RILPL1Q5EBL4 403 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 DTHD1Q6ZMT9 781 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 IGSF22Q8N9C0 903 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 WNT16Q9UBV4 365 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 TNFSF13BQ9Y275 285 aa20.46■□□□□ 0.87
LINC01238-205ENST00000567549 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.46■□□□□ 0.87
LINC01238-205ENST00000567549 WDFY4Q6ZS81 3184 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 CCDC169A6NNP5 214 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 TMEM189-UBE2V1I3L0A0 370 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 RABEP1Q15276 862 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 UVSSAQ2YD98 709 aa20.45■□□□□ 0.86
LINC01238-205ENST00000567549 PPM1LQ5SGD2 360 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms