RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 BRMS1Q9HCU9 246 aa7.58□□□□□ -1.2
CNOT1-212ENST00000567285 METTL5Q9NRN9 209 aaKnown RBP7.58□□□□□ -1.2
CNOT1-212ENST00000567285 REV1Q9UBZ9 1251 aa7.58□□□□□ -1.2
CNOT1-212ENST00000567285 ADAM30Q9UKF2 790 aa7.58□□□□□ -1.2
CNOT1-212ENST00000567285 RAB23Q9ULC3 237 aa7.58□□□□□ -1.2
CNOT1-212ENST00000567285 SMG5Q9UPR3 1016 aaKnown RBP7.58□□□□□ -1.2
CNOT1-212ENST00000567285 SIT1Q9Y3P8 196 aa7.58□□□□□ -1.2
CNOT1-212ENST00000567285 DDX49Q9Y6V7 483 aaKnown RBP7.58□□□□□ -1.2
CNOT1-212ENST00000567285 PTPRSQ13332 1948 aa7.58□□□□□ -1.2
CNOT1-212ENST00000567285 ITPR1Q14643 2758 aa7.58□□□□□ -1.2
CNOT1-212ENST00000567285 PDS5AQ29RF7 1337 aaKnown RBP7.57□□□□□ -1.2
CNOT1-212ENST00000567285 USP9XQ93008 2570 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-212ENST00000567285 SCAMP3O14828 347 aaKnown RBP7.57□□□□□ -1.2
CNOT1-212ENST00000567285 MMP3P08254 477 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 DNAJB1P25685 340 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 SHMT1P34896 483 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 CAMK1Q14012 370 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 MVPQ14764 893 aaKnown RBP7.57□□□□□ -1.2
CNOT1-212ENST00000567285 FAM83BQ5T0W9 1011 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 ANKRD54Q6NXT1 300 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 TAPT1Q6NXT6 567 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 LETMD1Q6P1Q0 360 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 RUFY4Q6ZNE9 571 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 TMEM179Q6ZVK1 233 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 POF1BQ8WVV4 589 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 ZCCHC14Q8WYQ9 949 aaKnown RBP7.57□□□□□ -1.2
CNOT1-212ENST00000567285 RNF34Q969K3 372 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 FGD4Q96M96 766 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 LRRC3Q9BY71 257 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 S1PR5Q9H228 398 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 RAVER2Q9HCJ3 691 aaKnown RBP7.57□□□□□ -1.2
CNOT1-212ENST00000567285 PARD6AQ9NPB6 346 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 HMG20BQ9P0W2 317 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 CCDC39Q9UFE4 941 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 TMX2Q9Y320 296 aa7.57□□□□□ -1.2
CNOT1-212ENST00000567285 FSD2A1L4K1 749 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 RSPH10B2B2RC85 870 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 CHURC1-FNTBB4DL54 471 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 PRNPP04156 253 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 RSPH10BP0C881 870 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 CD96P40200 585 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 THPOP40225 353 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 DYNLL1P63167 89 aaKnown RBP7.56□□□□□ -1.2
CNOT1-212ENST00000567285 CSTF1Q05048 431 aaKnown RBP7.56□□□□□ -1.2
CNOT1-212ENST00000567285 ICA1Q05084 483 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 BNIP3Q12983 259 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 TDGQ13569 410 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 SEZ6Q53EL9 994 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 TMEM201Q5SNT2 666 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 SLC6A19Q695T7 634 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 C19orf48Q6RUI8 117 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 CDH24Q86UP0 819 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 WFDC3Q8IUB2 231 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 MFSD2AQ8NA29 543 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 CHST13Q8NET6 341 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 SPPL3Q8TCT6 385 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 NECTIN4Q96NY8 510 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 SLF1Q9BQI6 1058 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 SPON2Q9BUD6 331 aa7.56□□□□□ -1.2
CNOT1-212ENST00000567285 SPATA6Q9NWH7 488 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-212ENST00000567285 DDX41Q9UJV9 622 aaKnown RBP7.56□□□□□ -1.2
CNOT1-212ENST00000567285 DBR1Q9UK59 544 aaKnown RBP7.56□□□□□ -1.2
CNOT1-212ENST00000567285 LAMTOR5O43504 91 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 TBC1D4O60343 1298 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 ITGB1P05556 798 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 HOXB8P17481 243 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-212ENST00000567285 NCLP19338 710 aaKnown RBP7.55□□□□□ -1.2
CNOT1-212ENST00000567285 TGM1P22735 817 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 APOBRQ0VD83 1088 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 LPAL2Q16609 132 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 ZNF574Q6ZN55 896 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-212ENST00000567285 ZDHHC14Q8IZN3 488 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 PRPF38AQ8NAV1 312 aaKnown RBP7.55□□□□□ -1.2
CNOT1-212ENST00000567285 REPS2Q8NFH8 660 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 VN1R2Q8NFZ6 395 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 ATP8B4Q8TF62 1192 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 DHX38Q92620 1227 aaKnown RBP7.55□□□□□ -1.2
CNOT1-212ENST00000567285 CDCA3Q99618 268 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-212ENST00000567285 POMKQ9H5K3 350 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 TBC1D17Q9HA65 648 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 VTA1Q9NP79 307 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 KLHL3Q9UH77 587 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 CDH22Q9UJ99 828 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 TPX2Q9ULW0 747 aaKnown RBP7.55□□□□□ -1.2
CNOT1-212ENST00000567285 CA14Q9ULX7 337 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 PCDHB14Q9Y5E9 798 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 PCDHGA2Q9Y5H1 932 aa7.55□□□□□ -1.2
CNOT1-212ENST00000567285 OAS3Q9Y6K5 1087 aaKnown RBP7.55□□□□□ -1.2
CNOT1-212ENST00000567285 CIAO1O76071 339 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 WNT11O96014 354 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 CEACAM5P06731 702 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 IL15P40933 162 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-212ENST00000567285 CLCQ05315 142 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 NKPD1Q17RQ9 610 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 ZNF528Q3MIS6 628 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 NAALADL2Q58DX5 795 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 PLEKHG4Q58EX7 1191 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 ADGRA1Q86SQ6 560 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 SIAH1Q8IUQ4 282 aa7.54□□□□□ -1.2
CNOT1-212ENST00000567285 SPACA3Q8IXA5 215 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms