RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 POP1Q99575 1024 aaKnown RBP16.78■□□□□ 0.28
COMMD4-215ENST00000566843 ARHGEF10LQ9HCE6 1279 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 MLXIPLQ9NP71 852 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 CTNNAL1Q9UBT7 734 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 LRRN2O75325 713 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 CYP1A2P05177 515 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 CHRNB2P17787 502 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 CDC25CP30307 473 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 SHMT1P34896 483 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 KRT17Q04695 432 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 BFSP1Q12934 665 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 STRN3Q13033 797 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 PPP1R21Q6ZMI0 780 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 HS2ST1Q7LGA3 356 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 ZNF720Q7Z2F6 126 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 AGGF1Q8N302 714 aaeCLIP16.77■□□□□ 0.28
COMMD4-215ENST00000566843 PSPC1Q8WXF1 523 aaKnown RBP16.77■□□□□ 0.28
COMMD4-215ENST00000566843 TMEM237Q96Q45 408 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 PCDHB18PQ96TA0 734 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 RNPEPL1Q9HAU8 725 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 PARVGQ9HBI0 331 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 ETNK1Q9HBU6 452 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 SPATS2LQ9NUQ6 558 aaKnown RBP16.77■□□□□ 0.28
COMMD4-215ENST00000566843 ZFATQ9P243 1243 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 DAGLAQ9Y4D2 1042 aa16.77■□□□□ 0.28
COMMD4-215ENST00000566843 EML1O00423 815 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 MAGEB2O15479 319 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 HIP1RO75146 1068 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.27
COMMD4-215ENST00000566843 CYP2J2P51589 502 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 RWDD2BP57060 319 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 CAV1Q03135 178 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 PTK6Q13882 451 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 MYBPC2Q14324 1141 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 CYP4X1Q8N118 509 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 CNBD1Q8NA66 436 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 SNF8Q96H20 258 aa16.77■□□□□ 0.27
COMMD4-215ENST00000566843 UBE2TQ9NPD8 197 aaPredicted RBP16.77■□□□□ 0.27
COMMD4-215ENST00000566843 FAM170AA1A519 330 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 FOSP01100 380 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-215ENST00000566843 CALB2P22676 271 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 FOXN2P32314 431 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 GPSM2P81274 684 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 CPNE8Q86YQ8 564 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 ARHGEF19Q8IW93 802 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 INPP5DQ92835 1189 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 HSD17B14Q9BPX1 270 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 TUFT1Q9NNX1 390 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 EURLQ9NYK6 297 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 NKIRAS1Q9NYS0 192 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 NINJ2Q9NZG7 142 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 RGL1Q9NZL6 768 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 NKX1-2Q9UD57 310 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-215ENST00000566843 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 STARD13Q9Y3M8 1113 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 FOXO6A8MYZ6 492 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 ABLIM1O14639 778 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 P4HA2O15460 535 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 PEX11AO75192 247 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 SERPINB2P05120 415 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 BAG6P46379 1132 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 KYNUQ16719 465 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 STXBP4Q6ZWJ1 553 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 KSR1Q8IVT5 923 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 MYLK2Q9H1R3 596 aa16.76■□□□□ 0.27
COMMD4-215ENST00000566843 SPOPO43791 374 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 SORBS3O60504 671 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 CETPP11597 493 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 ATP2B4P23634 1241 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 POLGP54098 1239 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-215ENST00000566843 YARSP54577 528 aaKnown RBP16.75■□□□□ 0.27
COMMD4-215ENST00000566843 PICALMQ13492 652 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 PRR5LQ6MZQ0 368 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 ENDOVQ8N8Q3 282 aaKnown RBP16.75■□□□□ 0.27
COMMD4-215ENST00000566843 ZNF564Q8TBZ8 553 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-215ENST00000566843 SH3TC2Q8TF17 1288 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 SH3GL3Q99963 347 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 STRA6Q9BX79 667 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 CYP39A1Q9NYL5 469 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
COMMD4-215ENST00000566843 NAALADL1Q9UQQ1 740 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 USP20Q9Y2K6 914 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 EME2A4GXA9 379 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-215ENST00000566843 CDH16O75309 829 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 CYP3A4P08684 503 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 MAN1A1P33908 653 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 EPC2Q52LR7 807 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 RELL1Q8IUW5 271 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 KCNV2Q8TDN2 545 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 PIGOQ8TEQ8 1089 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 STK32AQ8WU08 396 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 DCAF4Q8WV16 495 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 NUP85Q9BW27 656 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 OSBPL1AQ9BXW6 950 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 PITPNM3Q9BZ71 974 aa16.75■□□□□ 0.27
COMMD4-215ENST00000566843 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
COMMD4-215ENST00000566843 ITGA8P53708 1063 aa16.74■□□□□ 0.27
COMMD4-215ENST00000566843 IL9RQ01113 521 aa16.74■□□□□ 0.27
COMMD4-215ENST00000566843 SGO2Q562F6 1265 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms