RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 MFSD1Q9H3U5 465 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 SMOC2Q9H3U7 446 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 EPS15L1Q9UBC2 864 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 DUSP12Q9UNI6 340 aa16.56■□□□□ 0.24
RNF40-209ENST00000566703 CLUHO75153 1309 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 PROB1E7EW31 1015 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 F8W810 466 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 TGM5O43548 720 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 ST18O60284 1047 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 SEC24BO95487 1268 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 PRKCBP05771 671 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.24
RNF40-209ENST00000566703 EFNA5P52803 228 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 ELAVL2Q12926 359 aaKnown RBP16.55■□□□□ 0.24
RNF40-209ENST00000566703 TTC38Q5R3I4 469 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 POTEGQ6S5H5 508 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 PALB2Q86YC2 1186 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 TMEM105Q8N8V8 129 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 IFT74Q96LB3 600 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 PRKD2Q9BZL6 878 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 CCDC113Q9H0I3 377 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 PDZD7Q9H5P4 517 aa16.55■□□□□ 0.24
RNF40-209ENST00000566703 SH2B1Q9NRF2 756 aaPredicted RBP16.55■□□□□ 0.24
RNF40-209ENST00000566703 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.55■□□□□ 0.24
RNF40-209ENST00000566703 NOL7Q9UMY1 257 aaKnown RBP16.55■□□□□ 0.24
RNF40-209ENST00000566703 KMT2EQ8IZD2 1858 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 RFPL2O75678 378 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 TMEM132AQ24JP5 1023 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 PDXDC1Q6P996 788 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 APBB1IPQ7Z5R6 666 aaPredicted RBP16.54■□□□□ 0.24
RNF40-209ENST00000566703 NOSTRINQ8IVI9 506 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 C4orf32Q8N8J7 132 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 FAM184AQ8NB25 1140 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 PIK3R5Q8WYR1 880 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 BSNDQ8WZ55 320 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 KIFAP3Q92845 792 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 ZNF707Q96C28 371 aaPredicted RBP16.54■□□□□ 0.24
RNF40-209ENST00000566703 TTPALQ9BTX7 342 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 SNTG2Q9NY99 539 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 WNT16Q9UBV4 365 aa16.54■□□□□ 0.24
RNF40-209ENST00000566703 TTLL13PA6NNM8 815 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 H0Y858 1186 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 PTGESO14684 152 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
RNF40-209ENST00000566703 ZMYND10O75800 440 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 RECQL4O94761 1208 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
RNF40-209ENST00000566703 CCT6AP40227 531 aaKnown RBP16.53■□□□□ 0.24
RNF40-209ENST00000566703 GNL2Q13823 731 aaKnown RBP16.53■□□□□ 0.24
RNF40-209ENST00000566703 DCAF4L1Q3SXM0 396 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 B3GALT6Q96L58 329 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 RTP3Q9BQQ7 232 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 RAB34Q9BZG1 259 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 LRWD1Q9UFC0 647 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 ZFP37Q9Y6Q3 630 aaPredicted RBP16.53■□□□□ 0.24
RNF40-209ENST00000566703 ZDBF2Q9HCK1 2354 aa16.53■□□□□ 0.24
RNF40-209ENST00000566703 HNRNPA1P09651 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
RNF40-209ENST00000566703 SPATA31D3P0C874 917 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 NPR3P17342 541 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 AOC1P19801 751 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.24
RNF40-209ENST00000566703 NAB2Q15742 525 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 RTP2Q5QGT7 225 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 FAM171A1Q5VUB5 890 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 SPATA31D4Q6ZUB0 917 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 RTL10Q7L3V2 364 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 SLC44A3Q8N4M1 653 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 LNX1Q8TBB1 728 aaPredicted RBP16.52■□□□□ 0.24
RNF40-209ENST00000566703 RABGGTAQ92696 567 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 MYADMQ96S97 322 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 PAAF1Q9BRP4 392 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 BHMT2Q9H2M3 363 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 FBXL21Q9UKT6 434 aa16.52■□□□□ 0.24
RNF40-209ENST00000566703 DENND4AQ7Z401 1863 aa16.52■□□□□ 0.23
RNF40-209ENST00000566703 PHLPP2Q6ZVD8 1323 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 CASTOR2A6NHX0 329 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 TMEM189-UBE2V1I3L0A0 370 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 K7ERI5 159 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 LAD1O00515 517 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 GFRA3O60609 400 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 LAMP2P13473 410 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 HOXA9P31269 272 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 ECM1Q16610 540 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 NT5DC1Q5TFE4 455 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 EEF1DP3Q658K8 133 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 CWF19L1Q69YN2 538 aaKnown RBP16.51■□□□□ 0.23
RNF40-209ENST00000566703 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 PRSS55Q6UWB4 352 aaPredicted RBP16.51■□□□□ 0.23
RNF40-209ENST00000566703 IGSF22Q8N9C0 903 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 FLCNQ8NFG4 579 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 CLSTN3Q9BQT9 956 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 TMEM134Q9H6X4 195 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 FAM86C1Q9NVL1 165 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 KIAA1024Q9UPX6 916 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 TNFSF13BQ9Y275 285 aa16.51■□□□□ 0.23
RNF40-209ENST00000566703 TDRD15B5MCY1 1934 aaKnown RBP16.51■□□□□ 0.23
RNF40-209ENST00000566703 ANHXE9PGG2 379 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 KIF4AO95239 1232 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms