RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 VPS13AQ96RL7 3174 aa24.64■■□□□ 1.53
GGA2-206ENST00000566547 N4BP1O75113 896 aaKnown RBP24.63■■□□□ 1.53
GGA2-206ENST00000566547 CCT6AP40227 531 aaKnown RBP24.63■■□□□ 1.53
GGA2-206ENST00000566547 ORC2Q13416 577 aaPredicted RBP24.63■■□□□ 1.53
GGA2-206ENST00000566547 PRPF4BQ13523 1007 aaKnown RBP24.63■■□□□ 1.53
GGA2-206ENST00000566547 FAM187BQ17R55 369 aa24.63■■□□□ 1.53
GGA2-206ENST00000566547 EEF1DP3Q658K8 133 aa24.63■■□□□ 1.53
GGA2-206ENST00000566547 C15orf39Q6ZRI6 1047 aa24.63■■□□□ 1.53
GGA2-206ENST00000566547 OTOP3Q7RTS5 596 aa24.63■■□□□ 1.53
GGA2-206ENST00000566547 PTGESO14684 152 aa24.62■■□□□ 1.53
GGA2-206ENST00000566547 ST18O60284 1047 aa24.62■■□□□ 1.53
GGA2-206ENST00000566547 TADA2AO75478 443 aa24.62■■□□□ 1.53
GGA2-206ENST00000566547 HSP90AA2PQ14568 343 aaPredicted RBP24.62■■□□□ 1.53
GGA2-206ENST00000566547 USP41Q3LFD5 358 aa24.62■■□□□ 1.53
GGA2-206ENST00000566547 PRSS55Q6UWB4 352 aaPredicted RBP24.62■■□□□ 1.53
GGA2-206ENST00000566547 DEPTORQ8TB45 409 aa24.62■■□□□ 1.53
GGA2-206ENST00000566547 PRRX2Q99811 253 aa24.62■■□□□ 1.53
GGA2-206ENST00000566547 CCDC113Q9H0I3 377 aa24.62■■□□□ 1.53
GGA2-206ENST00000566547 C2orf40Q9H1Z8 148 aa24.62■■□□□ 1.53
GGA2-206ENST00000566547 ZFHX2Q9C0A1 2572 aaPredicted RBP24.62■■□□□ 1.53
GGA2-206ENST00000566547 N4BP3O15049 544 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 TGM5O43548 720 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 RECQL4O94761 1208 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 MAPK6Q16659 721 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 RTP2Q5QGT7 225 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 TMEM105Q8N8V8 129 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 CMASQ8NFW8 434 aaPredicted RBP24.61■■□□□ 1.53
GGA2-206ENST00000566547 ZNF707Q96C28 371 aaPredicted RBP24.61■■□□□ 1.53
GGA2-206ENST00000566547 BHMT2Q9H2M3 363 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 LRWD1Q9UFC0 647 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 KIAA1024Q9UPX6 916 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 GDAQ9Y2T3 454 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 TRIP11Q15643 1979 aa24.61■■□□□ 1.53
GGA2-206ENST00000566547 H0Y858 1186 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 KIF4AO95239 1232 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 NAMPTP43490 491 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 TOB1P50616 345 aaPredicted RBP24.6■■□□□ 1.53
GGA2-206ENST00000566547 TUSC3Q13454 348 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 HAUS3Q68CZ6 603 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 RSAD2Q8WXG1 361 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 SMG7Q92540 1137 aaKnown RBP24.6■■□□□ 1.53
GGA2-206ENST00000566547 KCNK12Q9HB15 430 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 PCDHB6Q9Y5E3 794 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 DOCK6Q96HP0 2047 aa24.6■■□□□ 1.53
GGA2-206ENST00000566547 ZMYM2Q9UBW7 1377 aa24.59■■□□□ 1.53
GGA2-206ENST00000566547 DOCK8Q8NF50 2099 aa24.59■■□□□ 1.53
GGA2-206ENST00000566547 PP2D1A8MPX8 630 aa24.59■■□□□ 1.53
GGA2-206ENST00000566547 ACKR2O00590 384 aa24.59■■□□□ 1.53
GGA2-206ENST00000566547 GBP2P32456 591 aaPredicted RBP24.59■■□□□ 1.53
GGA2-206ENST00000566547 TRAPPC10P48553 1259 aa24.59■■□□□ 1.53
GGA2-206ENST00000566547 FXR2P51116 673 aaKnown RBP eCLIP24.59■■□□□ 1.53
GGA2-206ENST00000566547 WDR6Q9NNW5 1121 aaKnown RBP24.59■■□□□ 1.53
GGA2-206ENST00000566547 DDX19AQ9NUU7 478 aaKnown RBP24.59■■□□□ 1.53
GGA2-206ENST00000566547 NOL7Q9UMY1 257 aaKnown RBP24.59■■□□□ 1.53
GGA2-206ENST00000566547 VWA8A3KMH1 1905 aa24.59■■□□□ 1.53
GGA2-206ENST00000566547 CLUHO75153 1309 aa24.59■■□□□ 1.53
GGA2-206ENST00000566547 CFAP54Q96N23 3096 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 WDR87Q6ZQQ6 2873 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 NARSO43776 548 aaKnown RBP24.58■■□□□ 1.53
GGA2-206ENST00000566547 THP07101 528 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 IGFBP6P24592 240 aaPredicted RBP24.58■■□□□ 1.53
GGA2-206ENST00000566547 PTGDRQ13258 359 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 TDGQ13569 410 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 NAB2Q15742 525 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 NT5DC1Q5TFE4 455 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 LILRA6Q6PI73 481 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 CEP57Q86XR8 500 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 SNX29Q8TEQ0 813 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 MYADMQ96S97 322 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 MFSD1Q9H3U5 465 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 FNIP2Q9P278 1114 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 KIF3AQ9Y496 699 aa24.58■■□□□ 1.53
GGA2-206ENST00000566547 SF3B1O75533 1304 aaKnown RBP eCLIP24.58■■□□□ 1.525e-8■■■■■ 37.4
GGA2-206ENST00000566547 E9PMD0 336 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 GLRA4Q5JXX5 417 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 FAM171A1Q5VUB5 890 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 FLCNQ8NFG4 579 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 ST13P5Q8NFI4 369 aaPredicted RBP24.57■■□□□ 1.52
GGA2-206ENST00000566547 ATOH1Q92858 354 aaPredicted RBP24.57■■□□□ 1.52
GGA2-206ENST00000566547 IFT74Q96LB3 600 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 ADPGKQ9BRR6 497 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 NT5C3AQ9H0P0 336 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 PIDD1Q9HB75 910 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.57■■□□□ 1.52
GGA2-206ENST00000566547 DPP7Q9UHL4 492 aa24.57■■□□□ 1.52
GGA2-206ENST00000566547 U2AF2P26368 475 aaKnown RBP eCLIP24.56■■□□□ 1.521e-6■■■□□ 16.3
GGA2-206ENST00000566547 CDC25AP30304 524 aa24.56■■□□□ 1.52
GGA2-206ENST00000566547 PPP2R5AQ15172 486 aa24.56■■□□□ 1.52
GGA2-206ENST00000566547 IL17AQ16552 155 aa24.56■■□□□ 1.52
GGA2-206ENST00000566547 ELMSAN1Q6PJG2 1045 aa24.56■■□□□ 1.52
GGA2-206ENST00000566547 CLSTN3Q9BQT9 956 aa24.56■■□□□ 1.52
GGA2-206ENST00000566547 PLEKHA4Q9H4M7 779 aa24.56■■□□□ 1.52
GGA2-206ENST00000566547 GALR2O43603 387 aaPredicted RBP24.55■■□□□ 1.52
GGA2-206ENST00000566547 MUTP22033 750 aa24.55■■□□□ 1.52
GGA2-206ENST00000566547 ATF7IP2Q5U623 682 aa24.55■■□□□ 1.52
GGA2-206ENST00000566547 CWF19L1Q69YN2 538 aaKnown RBP24.55■■□□□ 1.52
GGA2-206ENST00000566547 ASTLQ6HA08 431 aaPredicted RBP24.55■■□□□ 1.52
GGA2-206ENST00000566547 IGSF22Q8N9C0 903 aa24.55■■□□□ 1.52
GGA2-206ENST00000566547 LNX1Q8TBB1 728 aaPredicted RBP24.55■■□□□ 1.52
GGA2-206ENST00000566547 HDAC7Q8WUI4 952 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms