RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CHRNB2P17787 502 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 FGFR4P22455 802 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 PDE6BP35913 854 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 COPS2P61201 443 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 NCALDP61601 193 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 NFIAQ12857 509 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 USH1GQ495M9 461 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 RNF43Q68DV7 783 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 XXYLT1Q8NBI6 393 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 SNF8Q96H20 258 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 RXFP1Q9HBX9 757 aa23.12■■□□□ 1.29
SPSB3-208ENST00000566339 DBR1Q9UK59 544 aaKnown RBP23.12■■□□□ 1.29
SPSB3-208ENST00000566339 SORBS3O60504 671 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 TTC4O95801 387 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 POLR2MP0CAP2 368 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 SLC1A1P43005 524 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 PTP4A2Q12974 167 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 CEP55Q53EZ4 464 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 PPP1R21Q6ZMI0 780 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 ARHGEF19Q8IW93 802 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 PSPC1Q8WXF1 523 aaKnown RBP23.11■■□□□ 1.29
SPSB3-208ENST00000566339 SHC3Q92529 594 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 TRIM7Q9C029 511 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 DEFB129Q9H1M3 183 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 NOP53Q9NZM5 478 aaKnown RBP23.11■■□□□ 1.29
SPSB3-208ENST00000566339 PRKAG3Q9UGI9 489 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.11■■□□□ 1.29
SPSB3-208ENST00000566339 SCN9AQ15858 1988 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 ATRNL1Q5VV63 1379 aa23.11■■□□□ 1.29
SPSB3-208ENST00000566339 HIP1RO75146 1068 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 ATP5HO75947 161 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 GAS8O95995 478 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 YBX3P16989 372 aaKnown RBP eCLIP23.1■■□□□ 1.29
SPSB3-208ENST00000566339 MARCKSL1P49006 195 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 CENPCQ03188 943 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 IKQ13123 557 aaPredicted RBP23.1■■□□□ 1.29
SPSB3-208ENST00000566339 RASA3Q14644 834 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 ARHGEF18Q6ZSZ5 1173 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 SPATA21Q7Z572 469 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 CYP2W1Q8TAV3 490 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 KIFAP3Q92845 792 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 NUP85Q9BW27 656 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 BCAS3Q9H6U6 928 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 ARHGEF3Q9NR81 526 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 PRR12Q9ULL5 1215 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 SUFUQ9UMX1 484 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 ADGRA3Q8IWK6 1321 aa23.1■■□□□ 1.29
SPSB3-208ENST00000566339 UBOX5O94941 541 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 VIL1P09327 827 aaKnown RBP23.09■■□□□ 1.29
SPSB3-208ENST00000566339 SCNN1DP51172 638 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 CDR2Q01850 454 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 NR1H3Q13133 447 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 VSTM1Q6UX27 236 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 PODNQ7Z5L7 613 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 LARGE2Q8N3Y3 721 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 TRIM11Q96F44 468 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 L3MBTL3Q96JM7 780 aaPredicted RBP23.09■■□□□ 1.29
SPSB3-208ENST00000566339 MAGEB18Q96M61 343 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 PCDHB18PQ96TA0 734 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 CCDC77Q9BR77 488 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 AVENQ9NQS1 362 aaPredicted RBP23.09■■□□□ 1.29
SPSB3-208ENST00000566339 COQ4Q9Y3A0 265 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 MRPL11Q9Y3B7 192 aaKnown RBP23.09■■□□□ 1.29
SPSB3-208ENST00000566339 TMEM120BA0PK00 339 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 K7ENM7 598 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 RAD21O60216 631 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 PLA2G6O60733 806 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 LYPLA2O95372 231 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 GBP2P32456 591 aaPredicted RBP23.09■■□□□ 1.29
SPSB3-208ENST00000566339 MXI1P50539 228 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 SLC18A1P54219 525 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 PPP3CAQ08209 521 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 AADACL2Q6P093 401 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 NIPA1Q7RTP0 329 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 TRAIPQ9BWF2 469 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 ECT2Q9H8V3 914 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 AAASQ9NRG9 546 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 ABCF3Q9NUQ8 709 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 C15orf41Q9Y2V0 281 aa23.09■■□□□ 1.29
SPSB3-208ENST00000566339 SLX4Q8IY92 1834 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 SMIM23A6NLE4 172 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 TMEM110-MUSTN1A8MSY1 372 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 MYBL1P10243 752 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 HOXA13P31271 388 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-208ENST00000566339 GTF2H1P32780 548 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 CCNG1P51959 295 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 MAP2K1Q02750 393 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-208ENST00000566339 STAT4Q14765 748 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 SGO2Q562F6 1265 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 ACAD10Q6JQN1 1059 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 ENOSF1Q7L5Y1 443 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 TBC1D1Q86TI0 1168 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-208ENST00000566339 NOP9Q86U38 636 aaKnown RBP23.08■■□□□ 1.29
SPSB3-208ENST00000566339 ZFPM1Q8IX07 1006 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 DAW1Q8N136 415 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 TCP11Q8WWU5 503 aa23.08■■□□□ 1.29
SPSB3-208ENST00000566339 TCP11X1B4DZS4 312 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 ENTPD3O75355 529 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 ABHD2P08910 425 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 CLTAP09496 248 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms