RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 NT5DC4Q86YG4 428 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 FAM126BQ8IXS8 530 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 ZNF397Q8NF99 534 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-207ENST00000566095 CACTINQ8WUQ7 758 aaKnown RBP10.67□□□□□ -0.7
SF3B3-207ENST00000566095 APBB2Q92870 758 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 PCMTD1Q96MG8 357 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-207ENST00000566095 PPP1R16BQ96T49 567 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 CBWD1Q9BRT8 395 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 FAM213AQ9BRX8 229 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 MCOLN1Q9GZU1 580 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 PLEKHA5Q9HAU0 1116 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 PLCB1Q9NQ66 1216 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 TAB2Q9NYJ8 693 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 RBAKQ9NYW8 714 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-207ENST00000566095 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
SF3B3-207ENST00000566095 USP20Q9Y2K6 914 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 ANKRD63C9JTQ0 380 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 PQBP1O60828 265 aaKnown RBP10.66□□□□□ -0.7
SF3B3-207ENST00000566095 AKAP3O75969 853 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 CTSHP09668 335 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 CKBP12277 381 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 SKILP12757 684 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 ARF4P18085 180 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-207ENST00000566095 PROZP22891 400 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 RFC2P35250 354 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 PSMD6Q15008 389 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 AMHR2Q16671 573 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 TSR1Q2NL82 804 aaKnown RBP10.66□□□□□ -0.7
SF3B3-207ENST00000566095 HSP90AA4PQ58FG1 418 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 MIIPQ5JXC2 388 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 TWF2Q6IBS0 349 aaKnown RBP10.66□□□□□ -0.7
SF3B3-207ENST00000566095 LRRC8DQ7L1W4 858 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 ZBTB33Q86T24 672 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 TMTC1Q8IUR5 882 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 TC2NQ8N9U0 490 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 SPC24Q8NBT2 197 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 PGBD4Q96DM1 585 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 ZBTB10Q96DT7 871 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 ACAP3Q96P50 834 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 DNAJC7Q99615 494 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 IMPG2Q9BZV3 1241 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 VPS16Q9H269 839 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 PDZD7Q9H5P4 517 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 ASB7Q9H672 318 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 UBN1Q9NPG3 1134 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 ZNHIT6Q9NWK9 470 aaKnown RBP10.66□□□□□ -0.7
SF3B3-207ENST00000566095 PRKAG2Q9UGJ0 569 aa10.66□□□□□ -0.7
SF3B3-207ENST00000566095 LUC7L2Q9Y383 392 aaKnown RBP10.66□□□□□ -0.7
SF3B3-207ENST00000566095 ZSCAN12O43309 604 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 MFAP3LO75121 409 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 CD4P01730 458 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 TNNC2P02585 160 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 HARSP12081 509 aaKnown RBP10.65□□□□□ -0.7
SF3B3-207ENST00000566095 COL6A1P12109 1028 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 TRIM21P19474 475 aaKnown RBP10.65□□□□□ -0.7
SF3B3-207ENST00000566095 ADSSP30520 456 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 GRM5P41594 1212 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 TERF1P54274 439 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 ZBED6P86452 979 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 CCZ1BP86790 482 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 CCZ1P86791 482 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-207ENST00000566095 MYL7Q01449 175 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 CYP24A1Q07973 514 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 MGAT3Q09327 533 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 KCNH2Q12809 1159 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 NFX1Q12986 1120 aaKnown RBP10.65□□□□□ -0.7
SF3B3-207ENST00000566095 TRIM71Q2Q1W2 868 aaKnown RBP10.65□□□□□ -0.7
SF3B3-207ENST00000566095 FBXO47Q5MNV8 452 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 GBP6Q6ZN66 633 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 ZNF662Q6ZS27 426 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 WDR49Q8IV35 697 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 BRSK2Q8IWQ3 736 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 RDH13Q8NBN7 331 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 OR8K1Q8NGG5 319 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 SAAL1Q96ER3 474 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 BORCS6Q96GS4 357 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 ANKRD36BP1Q96IX9 119 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 ZNF668Q96K58 619 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-207ENST00000566095 MFSD14AQ96MC6 490 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 TTYH3Q9C0H2 523 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 DNAI2Q9GZS0 605 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 TRPV6Q9H1D0 765 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 CDT1Q9H211 546 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 KCNF1Q9H3M0 494 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 MINDY3Q9H8M7 445 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 PTPRHQ9HD43 1115 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 C1orf112Q9NSG2 853 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 ST3GAL5Q9UNP4 418 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 DERAQ9Y315 318 aa10.65□□□□□ -0.7
SF3B3-207ENST00000566095 B4GALT5O43286 388 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 EFCAB14O75071 495 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 NPTXRO95502 500 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 CHRNA1P02708 482 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 PFKMP08237 780 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 CLTBP09497 229 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 TMEM191BP0C7N4 346 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 TNNI1P19237 187 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 CASP4P49662 377 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 MXI1P50539 228 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 HIC1Q14526 733 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms