RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 MYBP10242 640 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 AFF1P51825 1210 aaKnown RBP23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 RNASELQ05823 741 aaKnown RBP23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 TPRNQ4KMQ1 711 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 SLFN12LQ6IEE8 588 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 SLC39A4Q6P5W5 647 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 EPM2AIP1Q7L775 607 aaPredicted RBP23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 CEP120Q8N960 986 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 GDPD5Q8WTR4 605 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 MYLIPQ8WY64 445 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 ZBTB45Q96K62 511 aaPredicted RBP23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 ZNF558Q96NG5 402 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 TMEM206Q9H813 350 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 LMCD1Q9NZU5 365 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 STXBP5LQ9Y2K9 1186 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 DSC1Q08554 894 aa23.03■■□□□ 1.28
SHCBP1-205ENST00000566016 DPYDQ12882 1025 aa23.03■■□□□ 1.28
SHCBP1-205ENST00000566016 GRIK3Q13003 919 aa23.03■■□□□ 1.28
SHCBP1-205ENST00000566016 ADGRE1Q14246 886 aa23.03■■□□□ 1.28
SHCBP1-205ENST00000566016 KCNT2Q6UVM3 1135 aa23.03■■□□□ 1.28
SHCBP1-205ENST00000566016 ZBTB33Q86T24 672 aa23.03■■□□□ 1.28
SHCBP1-205ENST00000566016 RPS6KC1Q96S38 1066 aa23.03■■□□□ 1.28
SHCBP1-205ENST00000566016 HAPLN2Q9GZV7 340 aa23.03■■□□□ 1.28
SHCBP1-205ENST00000566016 ANK1P16157 1881 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 REV3LO60673 3130 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 FAM189A1O60320 539 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 FOSL2P15408 326 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 ALDH7A1P49419 539 aaKnown RBP23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 SCNN1GP51170 649 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 UBE2HP62256 183 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 KCNA1Q09470 495 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 PSMD2Q13200 908 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 GPM6BQ13491 265 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 ELOA2Q8IYF1 753 aaPredicted RBP23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 HPS3Q969F9 1004 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 TMEM175Q9BSA9 504 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 LMAN2LQ9H0V9 348 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 NRDE2Q9H7Z3 1164 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 EXOC1Q9NV70 894 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 GDAQ9Y2T3 454 aa23.02■■□□□ 1.28
SHCBP1-205ENST00000566016 OGTO15294 1046 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 ZC3H11AO75152 810 aaKnown RBP eCLIP23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 POMCP01189 267 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 YARSP54577 528 aaKnown RBP23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 BCAR1P56945 870 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 UBE3AQ05086 875 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 POSTNQ15063 836 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 XKR4Q5GH76 650 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 KLHL23Q8NBE8 558 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 GLIS3Q8NEA6 775 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 ZNF507Q8TCN5 953 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 ACAP3Q96P50 834 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 KLK14Q9P0G3 267 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 PLAGL2Q9UPG8 496 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 PRUNE2Q8WUY3 3088 aa23.01■■□□□ 1.27
SHCBP1-205ENST00000566016 BRWD1Q9NSI6 2320 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 RFXAPO00287 272 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 PTGESO14684 152 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 GADD45BO75293 160 aaPredicted RBP23■■□□□ 1.27
SHCBP1-205ENST00000566016 NR1I2O75469 434 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 RPN1P04843 607 aaKnown RBP23■■□□□ 1.27
SHCBP1-205ENST00000566016 ITGB1P05556 798 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 CLTAP09496 248 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 PRR29P0C7W0 189 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 HARSP12081 509 aaKnown RBP23■■□□□ 1.27
SHCBP1-205ENST00000566016 MATR3P43243 847 aaKnown RBP eCLIP23■■□□□ 1.27
SHCBP1-205ENST00000566016 PLCB3Q01970 1234 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 BMT2Q1RMZ1 405 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 KMT5BQ4FZB7 885 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 ALKAL1Q6UXT8 129 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 ZNF280BQ86YH2 543 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 THNSL1Q8IYQ7 743 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 SNX27Q96L92 541 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 FAM193BQ96PV7 902 aaPredicted RBP23■■□□□ 1.27
SHCBP1-205ENST00000566016 MIOSQ9NXC5 875 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 LZTS1Q9Y250 596 aa23■■□□□ 1.27
SHCBP1-205ENST00000566016 ANKRD63C9JTQ0 380 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 B4GALT3O60512 393 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 FGF18O76093 207 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 DDHD2O94830 711 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 PRPF6O94906 941 aaKnown RBP22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 RHOBTB3O94955 611 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 POU5F1Q01860 360 aaKnown RBP22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 KCNB1Q14721 858 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 PTPROQ16827 1216 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 COLGALT2Q8IYK4 626 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 SLC39A11Q8N1S5 342 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 CCDC47Q96A33 483 aaKnown RBP22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 MRPL38Q96DV4 380 aaKnown RBP22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 MSTO1Q9BUK6 570 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 PLEKHA5Q9HAU0 1116 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 SPG21Q9NZD8 308 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 CNTN3Q9P232 1028 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 DNAJB4Q9UDY4 337 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 HOOK1Q9UJC3 728 aaKnown RBP22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 MTCH2Q9Y6C9 303 aa22.99■■□□□ 1.27
SHCBP1-205ENST00000566016 KINO60870 393 aaKnown RBP22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 THP07101 528 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 GALTP07902 379 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms