RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 FAM178BQ8IXR5 827 aa15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 COLGALT2Q8IYK4 626 aa15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 PABPC5Q96DU9 382 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 ASB2Q96Q27 587 aa15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 TCHPQ9BT92 498 aa15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 TRIM9Q9C026 710 aa15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 LRRC27Q9C0I9 530 aa15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 UBE2ZQ9H832 354 aaPredicted RBP15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 MAGEF1Q9HAY2 307 aa15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 NGRNQ9NPE2 291 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 SERTAD1Q9UHV2 236 aa15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-210ENST00000565966 NCOR1O75376 2440 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 FRMD3A2A2Y4 597 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 K7ENM7 598 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 NRP1O14786 923 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 ACTN4O43707 911 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 NR1I2O75469 434 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 RECQL4O94761 1208 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 SLFN14P0C7P3 912 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 IDEP14735 1019 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 GAP43P17677 238 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 PROZP22891 400 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 ABCD1P33897 745 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 NDUFA8P51970 172 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 AMPD3Q01432 767 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 GRIK3Q13003 919 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 COL19A1Q14993 1142 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 ZNF568Q3ZCX4 644 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 MPZL3Q6UWV2 235 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 ZPBP2Q6X784 338 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 DDX53Q86TM3 631 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 TMEM173Q86WV6 379 aaPredicted RBP15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 FSIP1Q8NA03 581 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 C7orf25Q9BPX7 421 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 TCF25Q9BQ70 676 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 CDT1Q9H211 546 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 GOLPH3LQ9H4A5 285 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 IGFLR1Q9H665 355 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 ENTPD7Q9NQZ7 604 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 SEL1LQ9UBV2 794 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 STK39Q9UEW8 545 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 XIRP2A4UGR9 3374 aa15.15■□□□□ 0.02
HERPUD1-210ENST00000565966 TOM1L1O75674 476 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 THP07101 528 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 MCF2P10911 925 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 GRM5P41594 1212 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 SYKP43405 635 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 OR1G1P47890 313 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 GTF2BQ00403 316 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 CTC1Q2NKJ3 1217 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 HERC4Q5GLZ8 1057 aaPredicted RBP15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 PLPP4Q5VZY2 271 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 EP400NLQ6ZTU2 488 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 ZNF720Q7Z2F6 126 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 ADGRD2Q7Z7M1 963 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 ZBTB33Q86T24 672 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 RBM23Q86U06 439 aaKnown RBP15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 CCDC65Q8IXS2 484 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 GRAMD1CQ8IYS0 662 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 CEP57L1Q8IYX8 460 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 VPS52Q8N1B4 723 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 ZBTB45Q96K62 511 aaPredicted RBP15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 CDCA3Q99618 268 aaPredicted RBP15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 CCDC94Q9BW85 323 aaPredicted RBP15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 ST6GALNAC4Q9H4F1 302 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 TLE6Q9H808 572 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 PANK4Q9NVE7 773 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 CLDND1Q9NY35 253 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 USP25Q9UHP3 1055 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 TBX20Q9UMR3 447 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 PCDHGC5Q9Y5F6 944 aa15.14■□□□□ 0.01
HERPUD1-210ENST00000565966 FSD2A1L4K1 749 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 ABLIM1O14639 778 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 CLDN3O15551 220 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 KCNA5P22460 613 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 CASP1P29466 404 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 GTF2F1P35269 517 aaKnown RBP eCLIP15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 AFMP43652 599 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 NRIP1P48552 1158 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 YARSP54577 528 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 ASIC1P78348 528 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 ADAM15Q13444 863 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 SMC1AQ14683 1233 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 ZC2HC1CQ53FD0 456 aaPredicted RBP15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 EFHBQ8N7U6 833 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 CEP120Q8N960 986 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 BICD1Q96G01 975 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 COLEC11Q9BWP8 271 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 STRA6Q9BX79 667 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 BLZF1Q9H2G9 400 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 TBC1D7Q9P0N9 293 aa15.13■□□□□ 0.01
HERPUD1-210ENST00000565966 MTCL1Q9Y4B5 1905 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-210ENST00000565966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.12■□□□□ 0.01
HERPUD1-210ENST00000565966 HIDE1A8MVS5 230 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms