RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SNTG2Q9NY99 539 aa8.48□□□□□ -1.05
CDH1-208ENST00000565810 PARP2Q9UGN5 583 aa8.48□□□□□ -1.05
CDH1-208ENST00000565810 LRFN2Q9ULH4 789 aa8.48□□□□□ -1.05
CDH1-208ENST00000565810 PCDHB7Q9Y5E2 793 aa8.48□□□□□ -1.05
CDH1-208ENST00000565810 ABLIM1O14639 778 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 HOXA2O43364 376 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 MGEA5O60502 916 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 AKAP3O75969 853 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 BAIAP3O94812 1187 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 IL18RAPO95256 599 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 EOMESO95936 686 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 FGBP02675 491 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 ACRP10323 421 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 MTIF2P46199 727 aaKnown RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 ACOT2P49753 483 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 IQCB1Q15051 598 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 UBXN11Q5T124 520 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 PSRC1Q6PGN9 363 aaPredicted RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 INTS8Q75QN2 995 aaKnown RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 FRMD5Q7Z6J6 570 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 LUZP1Q86V48 1076 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 ECHDC2Q86YB7 292 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 CD302Q8IX05 232 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 RNF169Q8NCN4 708 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 FAM212AQ96EL1 285 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 EEF2KMTQ96G04 330 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 CNOT6LQ96LI5 555 aaKnown RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 FBXL18Q96ME1 805 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 APOL6Q9BWW8 343 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 EIF2AQ9BY44 585 aaKnown RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 HAPLN2Q9GZV7 340 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 MTIF3Q9H2K0 278 aaKnown RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 PLEKHA5Q9HAU0 1116 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 FANCLQ9NW38 375 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 RBAKQ9NYW8 714 aaPredicted RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 ARMCX3Q9UH62 379 aaPredicted RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 CPSF3Q9UKF6 684 aaKnown RBP8.47□□□□□ -1.05
CDH1-208ENST00000565810 GIT1Q9Y2X7 761 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 IPPQ9Y573 584 aa8.47□□□□□ -1.05
CDH1-208ENST00000565810 ZBBXA8MT70 800 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 KCNJ18B7U540 433 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 C9IYK1 514 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 STX10O60499 249 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 RECQL4O94761 1208 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 AMHP03971 560 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 PRKCSHP14314 528 aaPredicted RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 EEF1GP26641 437 aaKnown RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 KCNJ6P48051 423 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 CASP4P49662 377 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 FAM189BP81408 668 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 PPP2R3AQ06190 1150 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 ENPEPQ07075 957 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 CYP24A1Q07973 514 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 KCNJ12Q14500 433 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 NCAPHQ15003 741 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 FILIP1LQ4L180 1135 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 SEZ6Q53EL9 994 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 TCERG1LQ5VWI1 586 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 LRRC55Q6ZSA7 311 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 MRPL10Q7Z7H8 261 aaKnown RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 RTN4RL1Q86UN2 441 aaPredicted RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 CBWD2Q8IUF1 395 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 BRSK2Q8IWQ3 736 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 ABI1Q8IZP0 508 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 CEP120Q8N960 986 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 CACTINQ8WUQ7 758 aaKnown RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 CCDC127Q96BQ5 260 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 MFSD14AQ96MC6 490 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 MED15Q96RN5 788 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 RPS6KC1Q96S38 1066 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 TSPAN18Q96SJ8 248 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 NXF3Q9H4D5 531 aaKnown RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 ELAC1Q9H777 363 aaKnown RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 SAMSN1Q9NSI8 373 aaKnown RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 TMEM161AQ9NX61 479 aa8.46□□□□□ -1.06
CDH1-208ENST00000565810 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.06
CDH1-208ENST00000565810 ARID2Q68CP9 1835 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 GOLGA6L3A6NEY3 463 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 LACTBL1A8MY62 500 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 PES1O00541 588 aaKnown RBP8.45□□□□□ -1.06
CDH1-208ENST00000565810 XPOTO43592 962 aaKnown RBP8.45□□□□□ -1.06
CDH1-208ENST00000565810 SERPINC1P01008 464 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 TPM3P06753 285 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 CXCL8P10145 99 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 DLATP10515 647 aaKnown RBP8.45□□□□□ -1.06
CDH1-208ENST00000565810 TNNI1P19237 187 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 AKAP5P24588 427 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 TNFSF9P41273 254 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 VAMP7P51809 220 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 AP3M2P53677 418 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 MARSP56192 900 aaKnown RBP8.45□□□□□ -1.06
CDH1-208ENST00000565810 PLCB2Q00722 1185 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 CETN1Q12798 172 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 BFSP1Q12934 665 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 PSMD6Q15008 389 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 ENOX2Q16206 610 aaKnown RBP8.45□□□□□ -1.06
CDH1-208ENST00000565810 UVSSAQ2YD98 709 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 HSP90AA4PQ58FG1 418 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 TCP11X2Q5H9J9 407 aa8.45□□□□□ -1.06
CDH1-208ENST00000565810 DCAF17Q5H9S7 520 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms