RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 LIG4P49917 911 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 CYP2J2P51589 502 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 PTENP60484 403 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 MAPK6Q16659 721 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 PAPD7Q5XG87 772 aaKnown RBP10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 ZPBP2Q6X784 338 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 TAS1R3Q7RTX0 852 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 ZNF410Q86VK4 478 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 TRIM59Q8IWR1 403 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 FAM186BQ8IYM0 893 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 XXYLT1Q8NBI6 393 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 NLRP4Q96MN2 994 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 MRPL4Q9BYD3 311 aaKnown RBP10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 NDST4Q9H3R1 872 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 FAM204AQ9H8W3 233 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 KIAA1586Q9HCI6 787 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 TSKSQ9UJT2 592 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 REXO2Q9Y3B8 237 aaKnown RBP10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 SAR1BQ9Y6B6 198 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 PTCH2Q9Y6C5 1203 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 SCN10AQ9Y5Y9 1956 aa10.21□□□□□ -0.78
CNEP1R1-206ENST00000565556 ANO9A1A5B4 782 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 KRT86O43790 486 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 TFRCP02786 760 aaKnown RBP10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 KRT13P13646 458 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 HOXC8P31273 242 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 ADAM17P78536 824 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 KCNA10Q16322 511 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 MIIPQ5JXC2 388 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 CCDC122Q5T0U0 273 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 CCDC70Q6NSX1 233 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 KIAA1328Q86T90 577 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 KIAA0319LQ8IZA0 1049 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 POMGNT1Q8WZA1 660 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 RUBCNQ92622 972 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 TSEN34Q9BSV6 310 aaKnown RBP10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 CCDC113Q9H0I3 377 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 IKZF4Q9H2S9 585 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 PRMT7Q9NVM4 692 aaPredicted RBP10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 HSPBP1Q9NZL4 362 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 LCMT1Q9UIC8 334 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 HPCAL4Q9UM19 191 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 CAPN11Q9UMQ6 739 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 PTPN22Q9Y2R2 807 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 STYXL1Q9Y6J8 313 aa10.2□□□□□ -0.78
CNEP1R1-206ENST00000565556 TTC26A0AVF1 554 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ANKRD63C9JTQ0 380 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 RNF225M0QZC1 329 aaPredicted RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ACKR2O00590 384 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 TRIM66O15016 1216 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ABL1P00519 1130 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 RPLP2P05387 115 aaKnown RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 PRKCBP05771 671 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ASGR1P07306 291 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CYP2C9P11712 490 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 MAGEA9P43362 315 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CASP4P49662 377 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 MEA1Q16626 185 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CCSAPQ6IQ19 270 aaPredicted RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CXCL17Q6UXB2 119 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 INTS8Q75QN2 995 aaKnown RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CCDC170Q8IYT3 715 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 NME8Q8N427 588 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ARRDC4Q8NCT1 418 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 JAKMIP2Q96AA8 810 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ZBTB10Q96DT7 871 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 IQCDQ96DY2 449 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 BORCS6Q96GS4 357 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ERGIC2Q96RQ1 377 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CHP1Q99653 195 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CBWD1Q9BRT8 395 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CRACR2AQ9BSW2 395 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 NUP58Q9BVL2 599 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 FZD8Q9H461 694 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 PCIF1Q9H4Z3 704 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ZNHIT6Q9NWK9 470 aaKnown RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 HDAC6Q9UBN7 1215 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 RSPH14Q9UHP6 348 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 MOXD2PA6NHM9 499 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 VGLL3A8MV65 326 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 INO80B-WBP1J3KQ70 363 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 LDHAP00338 332 aaKnown RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 VTNP04004 478 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ATP1A1P05023 1023 aaKnown RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 GJB1P08034 283 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ADSSP30520 456 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 NLRP11P59045 1033 aaKnown RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 ENPEPQ07075 957 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 PCBP1Q15365 356 aaKnown RBP eCLIP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 FAM187BQ17R55 369 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 NBPF20Q3BBV1 942 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 TAF2Q6P1X5 1199 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 SLC39A4Q6P5W5 647 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 LRRC31Q6UY01 552 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 USP37Q86T82 979 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 SESTD1Q86VW0 696 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 DNAJC5GQ8N7S2 189 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 CAGE1Q8TC20 777 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms