RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 B4GALT5O43286 388 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CBFA2T2O43439 604 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CSDE1O75534 798 aaKnown RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 AKAP3O75969 853 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 ERLIN2O94905 339 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 ADCY5O95622 1261 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CA3P07451 260 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 TPM2P07951 284 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CTSHP09668 335 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 IQCF3P0C7M6 154 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 DARSP14868 501 aaKnown RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 GARTP22102 1010 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 EIF4BP23588 611 aaKnown RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 ADSSP30520 456 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 PSMC2P35998 433 aaKnown RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 THPOP40225 353 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CASP4P49662 377 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 ZNF75DP51815 510 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CRYBB1P53674 252 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 UBASH3AP57075 661 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 AMHR2Q16671 573 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 ATF7IP2Q5U623 682 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 SLFN12LQ6IEE8 588 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 RPAINQ86UA6 219 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 FAM186BQ8IYM0 893 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 XXYLT1Q8NBI6 393 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 TMEM174Q8WUU8 243 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 ACO2Q99798 780 aaKnown RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 MKNK1Q9BUB5 465 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 C1QTNF1Q9BXJ1 281 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CELF4Q9BZC1 486 aaKnown RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CDHR5Q9HBB8 845 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 FRMD4BQ9Y2L6 1034 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 CDY2AQ9Y6F7 541 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 STYXL1Q9Y6J8 313 aa12.09□□□□□ -0.47
SF3B3-205ENST00000564899 COL4A4P53420 1690 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-205ENST00000564899 KAT6AQ92794 2004 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 PTPRSQ13332 1948 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 KIAA0391O15091 583 aaKnown RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 TSPAN1O60635 241 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 TOM1L1O75674 476 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 TPM3P06753 285 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 HARSP12081 509 aaKnown RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 FGFR4P22455 802 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 SFPQP23246 707 aaKnown RBP eCLIP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 COPB1P53618 953 aaKnown RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 MARSP56192 900 aaKnown RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 PCBP1Q15365 356 aaKnown RBP eCLIP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 TRIM71Q2Q1W2 868 aaKnown RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 ZNF568Q3ZCX4 644 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 MPZL3Q6UWV2 235 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 TSHZ1Q6ZSZ6 1077 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 CATSPER4Q7RTX7 472 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 APTXQ7Z2E3 356 aaKnown RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 SAAL1Q96ER3 474 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 ZBTB45Q96K62 511 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 TUBGCP2Q9BSJ2 902 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 TCHPQ9BT92 498 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 XPO4Q9C0E2 1151 aaKnown RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 VPS16Q9H269 839 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 METTL14Q9HCE5 456 aaKnown RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 ARMCX3Q9UH62 379 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-205ENST00000564899 SIP14410 1827 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 TET1Q8NFU7 2136 aa12.08□□□□□ -0.48
SF3B3-205ENST00000564899 A0A1B0GTH6 734 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 GOLGA8IPA6NC78 632 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 GOLGA8JA6NMD2 632 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 ZBBXA8MT70 800 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 PES1O00541 588 aaKnown RBP12.07□□□□□ -0.48
SF3B3-205ENST00000564899 N4BP3O15049 544 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 TLR3O15455 904 aaKnown RBP12.07□□□□□ -0.48
SF3B3-205ENST00000564899 CLDN3O15551 220 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 TLL1O43897 1013 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 EXTL3O43909 919 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 CAND2O75155 1236 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 ARF4P18085 180 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-205ENST00000564899 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
SF3B3-205ENST00000564899 MGAT3Q09327 533 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 HSP90AA2PQ14568 343 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-205ENST00000564899 NOLC1Q14978 699 aaKnown RBP eCLIP12.07□□□□□ -0.48
SF3B3-205ENST00000564899 MAN2A1Q16706 1144 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 FRMD5Q7Z6J6 570 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 ZBTB33Q86T24 672 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 GPD1LQ8N335 351 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 ZSWIM2Q8NEG5 633 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 TMEM40Q8WWA1 233 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 EVPLQ92817 2033 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 CPB2Q96IY4 423 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 NAP1L5Q96NT1 182 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-205ENST00000564899 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
SF3B3-205ENST00000564899 AGO2Q9UKV8 859 aaKnown RBP12.07□□□□□ -0.48
SF3B3-205ENST00000564899 TNFSF13BQ9Y275 285 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms