RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 SCAF4O95104 1147 aaKnown RBP4.24□□□□□ -1.73
CHD9-211ENST00000564600 OSMP13725 252 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 CNGA1P29973 690 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 C21orf58P58505 322 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 MRPS9P82933 396 aaKnown RBP4.24□□□□□ -1.73
CHD9-211ENST00000564600 MEF2AQ02078 507 aaPredicted RBP4.24□□□□□ -1.73
CHD9-211ENST00000564600 MST1LQ2TV78 715 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 TAF7LQ5H9L4 462 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 ZNF662Q6ZS27 426 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 TRMT2AQ8IZ69 625 aaKnown RBP4.24□□□□□ -1.73
CHD9-211ENST00000564600 WDR66Q8TBY9 1149 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 HOXB13Q92826 284 aaPredicted RBP4.24□□□□□ -1.73
CHD9-211ENST00000564600 AHCYL2Q96HN2 611 aaKnown RBP4.24□□□□□ -1.73
CHD9-211ENST00000564600 SLC2A13Q96QE2 648 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 PDCD2LQ9BRP1 358 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 NDC1Q9BTX1 674 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 CCM2LQ9NUG4 571 aaPredicted RBP4.24□□□□□ -1.73
CHD9-211ENST00000564600 CHST2Q9Y4C5 530 aa4.24□□□□□ -1.73
CHD9-211ENST00000564600 PNPLA7Q6ZV29 1317 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 RPTORQ8N122 1335 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 GRID2IPA4D2P6 1211 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 KIAA0355O15063 1070 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 AKR1B10O60218 316 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 LPXNO60711 386 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 SEPT2Q15019 361 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 METRNLQ641Q3 311 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 BEND2Q8NDZ0 799 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 OR2I1PQ8NGU4 316 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 STON2Q8WXE9 905 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 AUTS2Q8WXX7 1259 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 RAX2Q96IS3 184 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 CDC5LQ99459 802 aaKnown RBP4.23□□□□□ -1.73
CHD9-211ENST00000564600 LDAHQ9H6V9 325 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 IFT122Q9HBG6 1241 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 SPON1Q9HCB6 807 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 ADARB2Q9NS39 739 aaKnown RBP4.23□□□□□ -1.73
CHD9-211ENST00000564600 SIK3Q9Y2K2 1263 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 HS3ST4Q9Y661 456 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 ATRNL1Q5VV63 1379 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 PHLDB1Q86UU1 1377 aa4.23□□□□□ -1.73
CHD9-211ENST00000564600 TBKBP1A7MCY6 615 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 NCR1O76036 304 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 PEX11BO96011 259 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 FPR1P21462 350 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 FBLP22087 321 aaKnown RBP4.22□□□□□ -1.73
CHD9-211ENST00000564600 PTGS2P35354 604 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 SLC6A9P48067 706 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 PTH2RP49190 550 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 MTNR1BP49286 362 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 CLK3P49761 638 aaKnown RBP4.22□□□□□ -1.73
CHD9-211ENST00000564600 RNASE9P60153 205 aaKnown RBP4.22□□□□□ -1.73
CHD9-211ENST00000564600 NHLH2Q02577 135 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 BMT2Q1RMZ1 405 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 METTL24Q5JXM2 366 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 DDX42Q86XP3 938 aaKnown RBP eCLIP4.22□□□□□ -1.73
CHD9-211ENST00000564600 GPR156Q8NFN8 814 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 OR10H5Q8NGA6 315 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 ZNF480Q8WV37 535 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 PRDM13Q9H4Q3 707 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 SYNPO2LQ9H987 977 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 DNAJC28Q9NX36 388 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 TRPM5Q9NZQ8 1165 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 EIF2B4Q9UI10 523 aaKnown RBP4.22□□□□□ -1.73
CHD9-211ENST00000564600 HDAC5Q9UQL6 1122 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 PCDHGA2Q9Y5H1 932 aa4.22□□□□□ -1.73
CHD9-211ENST00000564600 CXorf49A8MYA2 514 aaPredicted RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 GASTP01350 101 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 HSP90B1P14625 803 aaKnown RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 ALOX15P16050 662 aaPredicted RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 ZSCAN20P17040 1043 aaPredicted RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 CRHR1P34998 444 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 PTPN7P35236 360 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 SREBF1P36956 1147 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 PDCD4Q53EL6 469 aaKnown RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 FAM102AQ5T9C2 384 aaPredicted RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 HECTD2Q5U5R9 776 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 SP5Q6BEB4 398 aaPredicted RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 KCNV1Q6PIU1 500 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 OLFML1Q6UWY5 402 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 ZNF572Q7Z3I7 529 aaPredicted RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 SPATS2Q86XZ4 545 aaKnown RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 ADGRG3Q86Y34 549 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 CBARPQ8N350 705 aaPredicted RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 OR7D4Q8NG98 312 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 ATL2Q8NHH9 583 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 MYOCQ99972 504 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 ACE2Q9BYF1 805 aaPredicted RBP4.21□□□□□ -1.74
CHD9-211ENST00000564600 PACSIN3Q9UKS6 424 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 SBNO2Q9Y2G9 1366 aa4.21□□□□□ -1.74
CHD9-211ENST00000564600 COL4A3Q01955 1670 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 CENPVL1A0A0U1RR11 272 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 CCDC78A2IDD5 438 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 ZAR1LA6NP61 321 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 PRR5-ARHGAP8B1AHC4 643 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 B5MCH6 92 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 TRIM24O15164 1050 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 PRSS23O95084 383 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 ABHD16AO95870 558 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 ERBB2P04626 1255 aa4.2□□□□□ -1.74
CHD9-211ENST00000564600 ITGB1P05556 798 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms