RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	PI4K2B	Q8TCG2	481 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ASAP3	Q8TDY4	903 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ARHGEF1	Q92888	912 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	TLR10	Q9BXR5	811 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	DHX36	Q9H2U1	1008 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	SAGE2P	A6NJ88	616 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	BCL10	O95999	233 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ASL	P04424	464 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	GRK2	P25098	689 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	MORF4L2	Q15014	288 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	TTC33	Q6PID6	262 aa	Predicted RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	SLC8A2	Q9UPR5	921 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	MFAP3	P55082	362 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	CASKIN2	Q8WXE0	1202 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	MEA1	Q16626	185 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	SETD3	Q86TU7	594 aa	Predicted RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	CDR2L	Q86X02	465 aa	Predicted RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	MS4A14	Q96JA4	679 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	MRPL1	Q9BYD6	325 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.5	□□□□□ -1.69	3e-7	■■■■□ 24.8
MACF1-231	ENST00000564288	TAS2R1	Q9NYW7	299 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	PHF24	Q9UPV7	400 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	CYP21A2	P08686	494 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	KPNA2	P52292	529 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	DLG4	P78352	724 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	LRRC36	Q1X8D7	754 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	RBM12	Q9NTZ6	932 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	PHTF1	Q9UMS5	762 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ORC6	Q9Y5N6	252 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	IQSEC2	Q5JU85	1478 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	CSNK2B	P67870	215 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ENPEP	Q07075	957 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	MTF1	Q14872	753 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ACCSL	Q4AC99	568 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	SPICE1	Q8N0Z3	855 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	PRDM16	Q9HAZ2	1276 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	POTEC	B2RU33	542 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ZPR1	O75312	459 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	MUT	P22033	750 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	TRIM67	Q6ZTA4	783 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	RHBDL2	Q9NX52	303 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ZSWIM5	Q9P217	1185 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	TNR	Q92752	1358 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	HOXC6	P09630	235 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	NAT14	Q8WUY8	206 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	LRRC59	Q96AG4	307 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ATPIF1	Q9UII2	106 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	SRGAP2C	P0DJJ0	459 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	SRGAP2B	P0DMP2	458 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	LUZP2	Q86TE4	346 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	CEP95	Q96GE4	821 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	SLC39A2	Q9NP94	309 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	FOS	P01100	380 aa	Predicted RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	ACAT1	P24752	427 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	POLR2B	P30876	1174 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	GEMIN4	P57678	1058 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	MTHFSD	Q2M296	383 aa	Known RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	TRABD	Q9H4I3	376 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	VAT1L	Q9HCJ6	419 aa		4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	CAB39	Q9Y376	341 aa	Predicted RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	KDM6A	O15550	1401 aa	Predicted RBP	4.5	□□□□□ -1.69
MACF1-231	ENST00000564288	PHGDH	O43175	533 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	DNAJC6	O75061	913 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	FTCD	O95954	541 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	S100A5	P33763	92 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TBC1D25	Q3MII6	688 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CDKAL1	Q5VV42	579 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	OLFML2B	Q68BL8	750 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ANKRD40	Q6AI12	368 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ADCY4	Q8NFM4	1077 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	KCNJ14	Q9UNX9	436 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TOP3A	Q13472	1001 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CCDC103	Q8IW40	242 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MAPKAPK5	Q8IW41	473 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	GDAP1	Q8TB36	358 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	LSM14B	Q9BX40	385 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	DCTN4	Q9UJW0	460 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TM9SF1	O15321	606 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	IFI35	P80217	286 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	USP31	Q70CQ4	1352 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CNOT3	O75175	753 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	APOA4	P06727	396 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	UBTFL6	P0CB48	400 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	KRT10	P13645	584 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	GP5	P40197	560 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	G2E3	Q7L622	706 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	KRT82	Q9NSB4	513 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	WBP11	Q9Y2W2	641 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TBX22	Q9Y458	520 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MROH5	Q6ZUA9	1318 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MTFR1	Q15390	333 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PM20D2	Q8IYS1	436 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CLIC5	Q9NZA1	410 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	HAO1	Q9UJM8	370 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	EPS8	Q12929	822 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TMEM63B	Q5T3F8	832 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.49	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms