RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 FBXW11Q9UKB1 542 aa17.78■□□□□ 0.44
RNF40-205ENST00000563909 DMXL2Q8TDJ6 3036 aa17.78■□□□□ 0.44
RNF40-205ENST00000563909 ARL5CA6NH57 179 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 XYLBO75191 536 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 C8AP07357 584 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 CYP3A4P08684 503 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 ITGA4P13612 1032 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 CNR2P34972 360 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 CLK2P49760 499 aaKnown RBP17.77■□□□□ 0.44
RNF40-205ENST00000563909 SETQ01105 290 aaPredicted RBP17.77■□□□□ 0.44
RNF40-205ENST00000563909 DSC1Q08554 894 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 UBXN11Q5T124 520 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 STPG1Q5TH74 334 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 FUT10Q6P4F1 479 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 PRSS55Q6UWB4 352 aaPredicted RBP17.77■□□□□ 0.44
RNF40-205ENST00000563909 CRYGNQ8WXF5 182 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 GAD1Q99259 594 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 SH2D3AQ9BRG2 576 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 HCFC1R1Q9NWW0 138 aa17.77■□□□□ 0.44
RNF40-205ENST00000563909 SEPT9Q9UHD8 586 aaPredicted RBP17.77■□□□□ 0.44
RNF40-205ENST00000563909 CNTNAP5Q8WYK1 1306 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 FLNBO75369 2602 aaKnown RBP17.76■□□□□ 0.43
RNF40-205ENST00000563909 IGKV6-21A0A0C4DH24 114 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 TMEM150BA6NC51 233 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 NCLP19338 710 aaKnown RBP17.76■□□□□ 0.43
RNF40-205ENST00000563909 HOXA11P31270 313 aaPredicted RBP17.76■□□□□ 0.43
RNF40-205ENST00000563909 CCDC6Q16204 474 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 PRR16Q569H4 304 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 HEATR6Q6AI08 1181 aaKnown RBP17.76■□□□□ 0.43
RNF40-205ENST00000563909 CEP68Q76N32 757 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 DNASE1L2Q92874 299 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 BRF1Q92994 677 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 MCRS1Q96EZ8 462 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 NIFKQ9BYG3 293 aaKnown RBP17.76■□□□□ 0.43
RNF40-205ENST00000563909 IFT122Q9HBG6 1241 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 KCNH3Q9ULD8 1083 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 LHX6Q9UPM6 363 aa17.76■□□□□ 0.43
RNF40-205ENST00000563909 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 SRRM3A6NNA2 597 aaPredicted RBP17.75■□□□□ 0.43
RNF40-205ENST00000563909 AXIN1O15169 862 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 CHMP2AO43633 222 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 MLH1P40692 756 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 SCNN1GP51170 649 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 NEK4P51957 841 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 RING1Q06587 406 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 ANKRD1Q15327 319 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 PABPC1LQ4VXU2 614 aaKnown RBP17.75■□□□□ 0.43
RNF40-205ENST00000563909 TANGO2Q6ICL3 276 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 PSAPL1Q6NUJ1 521 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 LONP2Q86WA8 852 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 SMG8Q8ND04 991 aaKnown RBP17.75■□□□□ 0.43
RNF40-205ENST00000563909 RABGGTAQ92696 567 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 ZFP42Q96MM3 310 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 LSM14BQ9BX40 385 aaKnown RBP17.75■□□□□ 0.43
RNF40-205ENST00000563909 GLT8D2Q9H1C3 349 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 ARRDC1-AS1Q9H2J1 176 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 RBM28Q9NW13 759 aaKnown RBP17.75■□□□□ 0.43
RNF40-205ENST00000563909 MIOSQ9NXC5 875 aa17.75■□□□□ 0.43
RNF40-205ENST00000563909 V9GY48 417 aaPredicted RBP17.75■□□□□ 0.43
RNF40-205ENST00000563909 hCG_1984214I3L0E3 225 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 ZBTB43O43298 467 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 HOXA9P31269 272 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 RCAN1P53805 252 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 RTP2Q5QGT7 225 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 APOA5Q6Q788 366 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 ZNF713Q8N859 430 aaPredicted RBP17.74■□□□□ 0.43
RNF40-205ENST00000563909 CNNM3Q8NE01 707 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 FAM3CQ92520 227 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 KIF2CQ99661 725 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 CLSTN3Q9BQT9 956 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 BRD9Q9H8M2 597 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 BARHL2Q9NY43 387 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 GDE1Q9NZC3 331 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 DNMT3BQ9UBC3 853 aaKnown RBP17.74■□□□□ 0.43
RNF40-205ENST00000563909 ADAM28Q9UKQ2 775 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 BRPF3Q9ULD4 1205 aa17.74■□□□□ 0.43
RNF40-205ENST00000563909 MRPS23Q9Y3D9 190 aaKnown RBP17.74■□□□□ 0.43
RNF40-205ENST00000563909 MAFO75444 373 aaPredicted RBP17.73■□□□□ 0.43
RNF40-205ENST00000563909 TADA2AO75478 443 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 ZNF806P0C7X5 589 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 EVCP57679 992 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 TOB2Q14106 344 aaPredicted RBP17.73■□□□□ 0.43
RNF40-205ENST00000563909 GRM2Q14416 872 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 RABEP1Q15276 862 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 XKR3Q5GH77 459 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 SLC7A14Q8TBB6 771 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 ELSPBP1Q96BH3 223 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 MINDY3Q9H8M7 445 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
RNF40-205ENST00000563909 IPPQ9Y573 584 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 F5P12259 2224 aa17.73■□□□□ 0.43
RNF40-205ENST00000563909 TMEM8BA6NDV4 472 aa17.72■□□□□ 0.43
RNF40-205ENST00000563909 SRGAP2CP0DJJ0 459 aa17.72■□□□□ 0.43
RNF40-205ENST00000563909 SPINK2P20155 84 aa17.72■□□□□ 0.43
RNF40-205ENST00000563909 FUT2Q10981 343 aa17.72■□□□□ 0.43
RNF40-205ENST00000563909 FOXC1Q12948 553 aa17.72■□□□□ 0.43
RNF40-205ENST00000563909 GAS6Q14393 721 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms