RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 LILRB3O75022 631 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 TADA2AO75478 443 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 TUSC3Q13454 348 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 HSP90AA2PQ14568 343 aaPredicted RBP19.46■□□□□ 0.71
NME3-205ENST00000563854 PTPN21Q16825 1174 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 NT5DC1Q5TFE4 455 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 TRIM67Q6ZTA4 783 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 TDRD5Q8NAT2 981 aaKnown RBP19.46■□□□□ 0.71
NME3-205ENST00000563854 DRC1Q96MC2 740 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 PAAF1Q9BRP4 392 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 GPR62Q9BZJ7 368 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 CXCL16Q9H2A7 254 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 MAN1C1Q9NR34 630 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 PHLPP2Q6ZVD8 1323 aa19.46■□□□□ 0.71
NME3-205ENST00000563854 TMEM221A6NGB7 291 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 M0R296 226 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 PTGESO14684 152 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 THP07101 528 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 NPTX2P47972 431 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 DSG1Q02413 1049 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 GLRA4Q5JXX5 417 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 RINT1Q6NUQ1 792 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 RNF168Q8IYW5 571 aaPredicted RBP19.45■□□□□ 0.7
NME3-205ENST00000563854 DAW1Q8N136 415 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 RIN2Q8WYP3 895 aaPredicted RBP19.45■□□□□ 0.7
NME3-205ENST00000563854 KMT5AQ9NQR1 393 aa19.45■□□□□ 0.7
NME3-205ENST00000563854 SF3B1O75533 1304 aaKnown RBP eCLIP19.45■□□□□ 0.7
NME3-205ENST00000563854 PLXNA3P51805 1871 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 VPS37CA5D8V6 355 aaPredicted RBP19.44■□□□□ 0.7
NME3-205ENST00000563854 SFI1A8K8P3 1242 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 KIF4AO95239 1232 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 GLUD1P00367 558 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 SPATA31D3P0C874 917 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 HARSP12081 509 aaKnown RBP19.44■□□□□ 0.7
NME3-205ENST00000563854 USP41Q3LFD5 358 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 ZNF568Q3ZCX4 644 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 KIAA0319Q5VV43 1072 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 SPATA31D4Q6ZUB0 917 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 APBB1IPQ7Z5R6 666 aaPredicted RBP19.44■□□□□ 0.7
NME3-205ENST00000563854 CEP57Q86XR8 500 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 PALB2Q86YC2 1186 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 PNMA5Q96PV4 448 aa19.44■□□□□ 0.7
NME3-205ENST00000563854 SLC16A4O15374 487 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 EFEMP2O95967 443 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 RPL17P18621 184 aaKnown RBP19.43■□□□□ 0.7
NME3-205ENST00000563854 OSTNP61366 133 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 MAPK7Q13164 816 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 ELMSAN1Q6PJG2 1045 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 PRSS55Q6UWB4 352 aaPredicted RBP19.43■□□□□ 0.7
NME3-205ENST00000563854 CCDC149Q6ZUS6 474 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 C1orf186Q6ZWK4 172 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 GPR149Q86SP6 731 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 PBXIP1Q96AQ6 731 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 MFSD14AQ96MC6 490 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 MRPL4Q9BYD3 311 aaKnown RBP19.43■□□□□ 0.7
NME3-205ENST00000563854 NT5C3AQ9H0P0 336 aa19.43■□□□□ 0.7
NME3-205ENST00000563854 ASGR2P07307 311 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 CACNB1Q02641 598 aaPredicted RBP19.42■□□□□ 0.7
NME3-205ENST00000563854 CEP120Q8N960 986 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 KREMEN2Q8NCW0 462 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 TCHPQ9BT92 498 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 TARS2Q9BW92 718 aaKnown RBP19.42■□□□□ 0.7
NME3-205ENST00000563854 CDT1Q9H211 546 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 RXFP1Q9HBX9 757 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.42■□□□□ 0.7
NME3-205ENST00000563854 CHST7Q9NS84 486 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 TNFSF13BQ9Y275 285 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 TRIOO75962 3097 aa19.42■□□□□ 0.7
NME3-205ENST00000563854 PLA2G4BP0C869 781 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 YARSP54577 528 aaKnown RBP19.41■□□□□ 0.7
NME3-205ENST00000563854 SIGLEC14Q08ET2 396 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 RTP2Q5QGT7 225 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 HYIQ5T013 277 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 FAM171A1Q5VUB5 890 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 ARL6IP4Q66PJ3 421 aaKnown RBP19.41■□□□□ 0.7
NME3-205ENST00000563854 SUGP1Q8IWZ8 645 aaKnown RBP19.41■□□□□ 0.7
NME3-205ENST00000563854 RASSF8Q8NHQ8 419 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 ACO2Q99798 780 aaKnown RBP19.41■□□□□ 0.7
NME3-205ENST00000563854 CCDC94Q9BW85 323 aaPredicted RBP19.41■□□□□ 0.7
NME3-205ENST00000563854 TMEM134Q9H6X4 195 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 ARHGAP28Q9P2N2 729 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 LIMD1Q9UGP4 676 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 DPP7Q9UHL4 492 aa19.41■□□□□ 0.7
NME3-205ENST00000563854 TECTAO75443 2155 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 NPHP3-ACAD11A0A0J9YXS1 232 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 CCDC195A0A1B0GUA6 201 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 RFPL2O75678 378 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 GUCY2CP25092 1073 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 STRN3Q13033 797 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 MTMR3Q13615 1198 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 DHX8Q14562 1220 aaKnown RBP19.4■□□□□ 0.7
NME3-205ENST00000563854 NAB2Q15742 525 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 TAS1R3Q7RTX0 852 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 SYT2Q8N9I0 419 aaPredicted RBP19.4■□□□□ 0.7
NME3-205ENST00000563854 ACSF2Q96CM8 615 aaPredicted RBP19.4■□□□□ 0.7
NME3-205ENST00000563854 TIPINQ9BVW5 301 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 GOLGA2P5Q9HBQ8 144 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 ANKFY1Q9P2R3 1169 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 SORCS3Q9UPU3 1222 aa19.4■□□□□ 0.7
NME3-205ENST00000563854 RBM19Q9Y4C8 960 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms