RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 ADGRE4PQ86SQ3 457 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 MSL3Q8N5Y2 521 aaKnown RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ZSWIM2Q8NEG5 633 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 SSH1Q8WYL5 1049 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 FAM89AQ96GI7 184 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 BOCQ9BWV1 1114 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 API5Q9BZZ5 524 aaKnown RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 PPP1R1BQ9UD71 204 aaPredicted RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 SPAG9O60271 1321 aaKnown RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 NSD3Q9BZ95 1437 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ADGRL3Q9HAR2 1447 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 PLEKHD1A6NEE1 506 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 CCP110O43303 1012 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 KIF1CO43896 1103 aaKnown RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 DNAJC8O75937 253 aaPredicted RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 SLU7O95391 586 aaKnown RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 IVLP07476 585 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 TNNT1P13805 278 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 H2AFXP16104 143 aaPredicted RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 CASQ1P31415 396 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 TNNT3P45378 269 aaPredicted RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 KCTD2Q14681 263 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ANKRD45Q5TZF3 282 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ICE2Q659A1 982 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 MORC1Q86VD1 984 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 MNS1Q8NEH6 495 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 OR5AN1Q8NGI8 311 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ERCC4Q92889 916 aaPredicted RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 C16orf92Q96LL3 132 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 PLEKHG4BQ96PX9 1271 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 NCAPGQ9BPX3 1015 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 IKZF4Q9H2S9 585 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 NELFAQ9H3P2 528 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 DCTPP1Q9H773 170 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 TTC12Q9H892 705 aaPredicted RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 FAM184BQ9ULE4 1060 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 NOB1Q9ULX3 412 aaKnown RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 PTPRCP08575 1304 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ZFYVE9O95405 1425 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 CDK12Q9NYV4 1490 aaPredicted RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ZCCHC11Q5TAX3 1644 aaKnown RBP4.06□□□□□ -1.76
LINC01416-201ENST00000563553 UNC79Q9P2D8 2635 aa4.06□□□□□ -1.76
LINC01416-201ENST00000563553 ADGRB1O14514 1584 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 GLI2P10070 1586 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 ARAP3Q8WWN8 1544 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 AOX1Q06278 1338 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 VGLL3A8MV65 326 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 M0R2C6 588 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 KRT4P19013 534 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 HIBADHP31937 336 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 ATP2C1P98194 919 aaPredicted RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 SLC25A3Q00325 362 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 ZCCHC8Q6NZY4 707 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 SARM1Q6SZW1 724 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 ZNF627Q7L945 461 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 LDLRAD3Q86YD5 345 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 RPAP2Q8IXW5 612 aaPredicted RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 C2orf69Q8N8R5 385 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 GOLGA5Q8TBA6 731 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 RABGGTAQ92696 567 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 PYCARDQ9ULZ3 195 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 TNNQ9UQP3 1299 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 VWA7Q9Y334 891 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 QRICH2Q9H0J4 1663 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 SYCP2Q9BX26 1530 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 ATP10BO94823 1461 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 CPSF1Q10570 1443 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 CD109Q6YHK3 1445 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 A0A1B0GUL7 405 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 RPS6KA5O75582 802 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 NPTXRO95502 500 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 GSPT1P15170 499 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 PTX3P26022 381 aaPredicted RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 FNTBP49356 437 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 TUBB4BP68371 445 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 EXOSC9Q06265 439 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 ABHD18Q0P651 414 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 MYBPC3Q14896 1274 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 ESRP1Q6NXG1 681 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 Q6ZRM9 215 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 PLA2G4DQ86XP0 818 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 SUGP1Q8IWZ8 645 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 TDRD7Q8NHU6 1098 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 LARP4BQ92615 738 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 CHFRQ96EP1 664 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 TMX3Q96JJ7 454 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 UTP14AQ9BVJ6 771 aaKnown RBP4.05□□□□□ -1.76
LINC01416-201ENST00000563553 UBXN6Q9BZV1 441 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 FAM107BQ9H098 131 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 CSRNP2Q9H175 543 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 TUBGCP6Q96RT7 1819 aa4.05□□□□□ -1.76
LINC01416-201ENST00000563553 FAM83GA6ND36 823 aa4.04□□□□□ -1.76
LINC01416-201ENST00000563553 PLD2O14939 933 aa4.04□□□□□ -1.76
LINC01416-201ENST00000563553 GTF2A1P52655 376 aaPredicted RBP4.04□□□□□ -1.76
LINC01416-201ENST00000563553 HNRNPH2P55795 449 aaKnown RBP4.04□□□□□ -1.76
LINC01416-201ENST00000563553 GSDMDP57764 484 aa4.04□□□□□ -1.76
LINC01416-201ENST00000563553 PKP1Q13835 747 aa4.04□□□□□ -1.76
LINC01416-201ENST00000563553 RRP1BQ14684 758 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms