RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 FBXL21Q9UKT6 434 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 USP20Q9Y2K6 914 aa18.61■□□□□ 0.57
HDGFL3-203ENST00000563404 KRBA1A5PL33 1030 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 PTGESO14684 152 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 C1RP00736 705 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 CFHP08603 1231 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 ATP2B1P20020 1258 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 HSP90AA2PQ14568 343 aaPredicted RBP18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 PRSS55Q6UWB4 352 aaPredicted RBP18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 FRMD5Q7Z6J6 570 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 GPR65Q8IYL9 337 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 SLC44A3Q8N4M1 653 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 PLEKHA4Q9H4M7 779 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 PDZD7Q9H5P4 517 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 PRMT7Q9NVM4 692 aaPredicted RBP18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 DOCK8Q8NF50 2099 aa18.6■□□□□ 0.57
HDGFL3-203ENST00000563404 MTCL1Q9Y4B5 1905 aaKnown RBP18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 TADA2AO75478 443 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 MCM7P33993 719 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 GUCY1B3Q02153 619 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 NAB2Q15742 525 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 FAM187BQ17R55 369 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 CCDC105Q8IYK2 499 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 ST13P5Q8NFI4 369 aaPredicted RBP18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 HASPINQ8TF76 798 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 STAMQ92783 540 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 PRIMPOLQ96LW4 560 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 PRKD2Q9BZL6 878 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 TUFT1Q9NNX1 390 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 ZDHHC7Q9NXF8 308 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 SNTG2Q9NY99 539 aa18.59■□□□□ 0.57
HDGFL3-203ENST00000563404 CASTOR2A6NHX0 329 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 KIF4AO95239 1232 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 IGFBP6P24592 240 aaPredicted RBP18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 NEK4P51957 841 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 TUSC3Q13454 348 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 ELMSAN1Q6PJG2 1045 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 DTWD2Q8NBA8 298 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 MCPH1Q8NEM0 835 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 CLSTN3Q9BQT9 956 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 POLR3CQ9BUI4 534 aaPredicted RBP18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 CCDC113Q9H0I3 377 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 PIDD1Q9HB75 910 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 WNT16Q9UBV4 365 aa18.58■□□□□ 0.56
HDGFL3-203ENST00000563404 ZMYND10O75800 440 aa18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 LAMP2P13473 410 aa18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 TRIM29Q14134 588 aa18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 EEF1DP3Q658K8 133 aa18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 GET4Q7L5D6 327 aaPredicted RBP18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 LNX1Q8TBB1 728 aaPredicted RBP18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 RTP3Q9BQQ7 232 aa18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 POLD4Q9HCU8 107 aa18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 FBXW11Q9UKB1 542 aa18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 CA14Q9ULX7 337 aa18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 PTPRZ1P23471 2315 aaPredicted RBP18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 RIF1Q5UIP0 2472 aaKnown RBP18.57■□□□□ 0.56
HDGFL3-203ENST00000563404 SF3B1O75533 1304 aaKnown RBP eCLIP18.56■□□□□ 0.564e-7■■■■■ 133.7
HDGFL3-203ENST00000563404 ANHXE9PGG2 379 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 N4BP3O15049 544 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 ADAM12O43184 909 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 RECQL4O94761 1208 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 SRFP11831 508 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 CYP11B2P19099 503 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 NTHL1P78549 312 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 HTR4Q13639 388 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 ANGPT1Q15389 498 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 ZNF174Q15697 407 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 ECM1Q16610 540 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 FAM171A1Q5VUB5 890 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 PADI6Q6TGC4 694 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 NOSTRINQ8IVI9 506 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 ZBTB8OSQ8IWT0 167 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 NACC1Q96RE7 527 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 TTPALQ9BTX7 342 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 GTF3C3Q9Y5Q9 886 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 DOCK6Q96HP0 2047 aa18.56■□□□□ 0.56
HDGFL3-203ENST00000563404 SEC24BO95487 1268 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 PRKCBP05771 671 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 THP07101 528 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 RPA1P27694 616 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 CREMQ03060 361 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 PRPF4BQ13523 1007 aaKnown RBP18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 CEP57Q86XR8 500 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 GPR152Q8TDT2 470 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 PIK3R5Q8WYR1 880 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 NXPE3Q969Y0 559 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 SNX27Q96L92 541 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 RPP25Q9BUL9 199 aaKnown RBP18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 KIFC3Q9BVG8 833 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 C2orf40Q9H1Z8 148 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 NUMBLQ9Y6R0 609 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 WDR87Q6ZQQ6 2873 aa18.55■□□□□ 0.56
HDGFL3-203ENST00000563404 ACKR2O00590 384 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 OR52Z1P0C646 297 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 LIG1P18858 919 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 PSMD5Q16401 504 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 MAPK6Q16659 721 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 GRASPQ7Z6J2 395 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms