RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 LXNQ9BS40 222 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 MINDY3Q9H8M7 445 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 NEUROG3Q9Y4Z2 214 aa11.28□□□□□ -0.6
SNX29-202ENST00000563308 BPTFQ12830 3046 aa11.27□□□□□ -0.6
SNX29-202ENST00000563308 DENND4AQ7Z401 1863 aa11.27□□□□□ -0.6
SNX29-202ENST00000563308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 ZNF623O75123 536 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 PLA2G2AP14555 144 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 SFPQP23246 707 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX29-202ENST00000563308 HOXA11P31270 313 aaPredicted RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 YWHABP31946 246 aaKnown RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 CNR2P34972 360 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 RDXP35241 583 aaKnown RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 LAMTOR4Q0VGL1 99 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 CTTNQ14247 550 aaKnown RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 SF3A2Q15428 464 aaKnown RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 MLF2Q15773 248 aaPredicted RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 DAB2IPQ5VWQ8 1189 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 RNF43Q68DV7 783 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 NCAPH2Q6IBW4 605 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 RSPO2Q6UXX9 243 aaPredicted RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 PROSER1Q86XN7 944 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 SLC39A11Q8N1S5 342 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 LPPQ93052 612 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 TMEM143Q96AN5 459 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 CEP170P1Q96L14 293 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 NLRP4Q96MN2 994 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 BBC3Q96PG8 261 aaPredicted RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 MTMR9Q96QG7 549 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 JPH2Q9BR39 696 aaPredicted RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 ZSWIM4Q9H7M6 989 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 XPNPEP1Q9NQW7 623 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 PRMT8Q9NR22 394 aaPredicted RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 DACT1Q9NYF0 836 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 SPG21Q9NZD8 308 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.61
SNX29-202ENST00000563308 PPME1Q9Y570 386 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 COL4A3BPQ9Y5P4 624 aa11.27□□□□□ -0.61
SNX29-202ENST00000563308 USP9XQ93008 2570 aaPredicted RBP11.26□□□□□ -0.61
SNX29-202ENST00000563308 B4GALT3O60512 393 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 DKC1O60832 514 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNX29-202ENST00000563308 LYPLA2O95372 231 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 NTRK1P04629 796 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 EPCAMP16422 314 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 RFC5P40937 340 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 FOSBP53539 338 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 PFKPQ01813 784 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 UBXN11Q5T124 520 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 C15orf39Q6ZRI6 1047 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 CATSPER4Q7RTX7 472 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 TMEM173Q86WV6 379 aaPredicted RBP11.26□□□□□ -0.61
SNX29-202ENST00000563308 SLFN12Q8IYM2 578 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 ABI1Q8IZP0 508 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 SLC7A3Q8WY07 619 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 LRIG1Q96JA1 1093 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 KIF2CQ99661 725 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 EIF2AK1Q9BQI3 630 aaKnown RBP11.26□□□□□ -0.61
SNX29-202ENST00000563308 INO80BQ9C086 356 aaPredicted RBP11.26□□□□□ -0.61
SNX29-202ENST00000563308 LTB4R2Q9NPC1 389 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 BMP2KQ9NSY1 1161 aaPredicted RBP11.26□□□□□ -0.61
SNX29-202ENST00000563308 AGPAT5Q9NUQ2 364 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 FAM105AQ9NUU6 356 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 EPS15L1Q9UBC2 864 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 PIN4Q9Y237 131 aaKnown RBP11.26□□□□□ -0.61
SNX29-202ENST00000563308 RAI2Q9Y5P3 530 aa11.26□□□□□ -0.61
SNX29-202ENST00000563308 IGSF10Q6WRI0 2623 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 J3QKU1 62 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 OFD1O75665 1012 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 BAG4O95429 457 aaKnown RBP11.25□□□□□ -0.61
SNX29-202ENST00000563308 SRGAP2CP0DJJ0 459 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 RPS9P46781 194 aaKnown RBP11.25□□□□□ -0.61
SNX29-202ENST00000563308 AFF1P51825 1210 aaKnown RBP11.25□□□□□ -0.61
SNX29-202ENST00000563308 POLGP54098 1239 aaPredicted RBP11.25□□□□□ -0.61
SNX29-202ENST00000563308 BCAR1P56945 870 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 EMC2Q15006 297 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 LONRF3Q496Y0 759 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 SLC44A4Q53GD3 710 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 XKR9Q5GH70 373 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 TWF2Q6IBS0 349 aaKnown RBP11.25□□□□□ -0.61
SNX29-202ENST00000563308 AGMOQ6ZNB7 445 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 MRPL10Q7Z7H8 261 aaKnown RBP11.25□□□□□ -0.61
SNX29-202ENST00000563308 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 TPH2Q8IWU9 490 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 BCL7CQ8WUZ0 217 aaPredicted RBP11.25□□□□□ -0.61
SNX29-202ENST00000563308 PSPC1Q8WXF1 523 aaKnown RBP11.25□□□□□ -0.61
SNX29-202ENST00000563308 MYADMQ96S97 322 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 TMEM60Q9H2L4 133 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 TBC1D13Q9NVG8 400 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 MSRB2Q9Y3D2 182 aa11.25□□□□□ -0.61
SNX29-202ENST00000563308 A0A087WWV3 80 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 AXIN1O15169 862 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 GAS2O43903 313 aaKnown RBP11.24□□□□□ -0.61
SNX29-202ENST00000563308 MARCH6O60337 910 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 TOP3BO95985 862 aaKnown RBP11.24□□□□□ -0.61
SNX29-202ENST00000563308 ZNF806P0C7X5 589 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 CCR3P51677 355 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 429.8 ms