RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ZNF653Q96CK0 615 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 NT5C1BQ96P26 610 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 TACO1Q9BSH4 297 aaKnown RBP14.04□□□□□ -0.16
USB1-207ENST00000563149 ZNF70Q9UC06 446 aaPredicted RBP14.04□□□□□ -0.16
USB1-207ENST00000563149 CCPG1Q9ULG6 757 aa14.04□□□□□ -0.16
USB1-207ENST00000563149 PSME4Q14997 1843 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 CCT8L1PA6NM43 557 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 DNM1LO00429 736 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 CYP11B1P15538 503 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 ITIH2P19823 946 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 SCTRP47872 440 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 JAK3P52333 1124 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 CAV1Q03135 178 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 GRIPAP1Q4V328 841 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 ZNF746Q6NUN9 644 aaPredicted RBP14.03□□□□□ -0.16
USB1-207ENST00000563149 RNF207Q6ZRF8 634 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 MIGA2Q7L4E1 593 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 MAP4K3Q8IVH8 894 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 MAGEC3Q8TD91 643 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 HELQQ8TDG4 1101 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 PARD3BQ8TEW8 1205 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 KAT5Q92993 513 aa14.03□□□□□ -0.16
USB1-207ENST00000563149 TISP43B9A030 160 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 PLSCR1O15162 318 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 ZC3H11AO75152 810 aaKnown RBP eCLIP14.02□□□□□ -0.16
USB1-207ENST00000563149 ADRB2P07550 413 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 SFNP31947 248 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 SLC1A1P43005 524 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 PEX3P56589 373 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 PSMC5P62195 406 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 AUHQ13825 339 aaKnown RBP14.02□□□□□ -0.16
USB1-207ENST00000563149 SNRNP35Q16560 246 aaKnown RBP14.02□□□□□ -0.16
USB1-207ENST00000563149 SLC47A2Q86VL8 602 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 FBXL13Q8NEE6 735 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 RDM1Q8NG50 284 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 GRK7Q8WTQ7 553 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 C7orf43Q8WVR3 580 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 PSPC1Q8WXF1 523 aaKnown RBP14.02□□□□□ -0.16
USB1-207ENST00000563149 TRIM11Q96F44 468 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 SGSM3Q96HU1 749 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 MFSD14AQ96MC6 490 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 SERPINB12Q96P63 405 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 C17orf75Q9HAS0 396 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 AVENQ9NQS1 362 aaPredicted RBP14.02□□□□□ -0.16
USB1-207ENST00000563149 HOMER3Q9NSC5 361 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 SAMD15Q9P1V8 674 aa14.02□□□□□ -0.16
USB1-207ENST00000563149 SLC16A4O15374 487 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 PPIP5K2O43314 1243 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 MYBL1P10243 752 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 IFI35P80217 286 aaPredicted RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 MAP2K1Q02750 393 aaPredicted RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 MTMR1Q13613 665 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 DLGAP5Q15398 846 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 PPP1R7Q15435 360 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 CLEC16AQ2KHT3 1053 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 SPDYE2Q495Y8 402 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 RSBN1LQ6PCB5 846 aaPredicted RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 ZNF677Q86XU0 584 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 CLEC4DQ8WXI8 215 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 DDX1Q92499 740 aaKnown RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 FBXL18Q96ME1 805 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 RAB20Q9NX57 234 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 COL20A1Q9P218 1284 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 TBX20Q9UMR3 447 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 CNTNAP1P78357 1384 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 ASTN2O75129 1339 aaPredicted RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 RGPD3A6NKT7 1758 aaPredicted RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 RGPD4Q7Z3J3 1758 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 YDJCA8MPS7 323 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 ABCD1P33897 745 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 RDXP35241 583 aaKnown RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 GCNT1Q02742 428 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 CNGA2Q16280 664 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 NBPF9Q3BBW0 867 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 SGO2Q562F6 1265 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 RHBDF2Q6PJF5 856 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
USB1-207ENST00000563149 FAM83AQ86UY5 434 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 PARP9Q8IXQ6 854 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 SPIRE2Q8WWL2 714 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 SEMA4DQ92854 862 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 AGBL1Q96MI9 1066 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 NTPCRQ9BSD7 190 aaKnown RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 QTRT2Q9H974 415 aaKnown RBP14.01□□□□□ -0.17
USB1-207ENST00000563149 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
USB1-207ENST00000563149 TCRBV7S2A1N4TA0A589 114 aa14□□□□□ -0.17
USB1-207ENST00000563149 WDR64B1ANS9 1081 aa14□□□□□ -0.17
USB1-207ENST00000563149 ASNSP08243 561 aa14□□□□□ -0.17
USB1-207ENST00000563149 FGFR4P22455 802 aa14□□□□□ -0.17
USB1-207ENST00000563149 CNGA1P29973 690 aa14□□□□□ -0.17
USB1-207ENST00000563149 GSCP56915 257 aaPredicted RBP14□□□□□ -0.17
USB1-207ENST00000563149 MRPS9P82933 396 aaKnown RBP14□□□□□ -0.17
USB1-207ENST00000563149 KRT76Q01546 638 aa14□□□□□ -0.17
USB1-207ENST00000563149 MAP3K10Q02779 954 aa14□□□□□ -0.17
USB1-207ENST00000563149 PTP4A2Q12974 167 aa14□□□□□ -0.17
USB1-207ENST00000563149 PTK6Q13882 451 aa14□□□□□ -0.17
USB1-207ENST00000563149 SNCBQ16143 134 aa14□□□□□ -0.17
USB1-207ENST00000563149 CYB5D1Q6P9G0 228 aa14□□□□□ -0.17
USB1-207ENST00000563149 CBWD2Q8IUF1 395 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms