RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 CACNB2Q08289 660 aaPredicted RBP8.25□□□□□ -1.09
SNX29-201ENST00000562510 ALCAMQ13740 583 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 EMC2Q15006 297 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 LRRC26Q2I0M4 334 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 ZC2HC1CQ53FD0 456 aaPredicted RBP8.25□□□□□ -1.09
SNX29-201ENST00000562510 HSP90AA4PQ58FG1 418 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 ZNF484Q5JVG2 852 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 APTXQ7Z2E3 356 aaKnown RBP8.25□□□□□ -1.09
SNX29-201ENST00000562510 NELFCDQ8IXH7 590 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 ZC3H3Q8IXZ2 948 aaKnown RBP8.25□□□□□ -1.09
SNX29-201ENST00000562510 CSGALNACT2Q8N6G5 542 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 SLC7A3Q8WY07 619 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
SNX29-201ENST00000562510 TSG101Q99816 390 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 RNPEPQ9H4A4 650 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 IFNKQ9P0W0 207 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 LIMA1Q9UHB6 759 aaKnown RBP8.25□□□□□ -1.09
SNX29-201ENST00000562510 TRAF3IP3Q9Y228 551 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 MGAMO43451 1857 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 UBE4BO95155 1302 aa8.25□□□□□ -1.09
SNX29-201ENST00000562510 ZSWIM8A7E2V4 1837 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 KCNJ18B7U540 433 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 H3BRB1 525 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 K7ENM7 598 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 TGFB1I1O43294 461 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 CBFA2T2O43439 604 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 GAS2O43903 313 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 MSCO60682 206 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 FGFR1OPO95684 399 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 SERPINC1P01008 464 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 INSRRP14616 1297 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 EEF1GP26641 437 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 CDC25BP30305 580 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 NPTX2P47972 431 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 CPT1AP50416 773 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 PEX3P56589 373 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 UBASH3AP57075 661 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 FKBP3Q00688 224 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 KCNA1Q09470 495 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 TBC1D8BQ0IIM8 1120 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 KCNJ12Q14500 433 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 DBN1Q16643 649 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 NFIL3Q16649 462 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 EDRF1Q3B7T1 1238 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 BRDTQ58F21 947 aaPredicted RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 TCP11X2Q5H9J9 407 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 IER5Q5VY09 327 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 LRRC55Q6ZSA7 311 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 HAUS6Q7Z4H7 955 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 TLK2Q86UE8 772 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 PGBD3Q8N328 593 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 TMEM161BQ8NDZ6 487 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 BSNDQ8WZ55 320 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 KCNN1Q92952 543 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 TMEM143Q96AN5 459 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 HVCN1Q96D96 273 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 IFT74Q96LB3 600 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 CEP63Q96MT8 703 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 NAP1L5Q96NT1 182 aaPredicted RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 CTAGE1Q96RT6 745 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 CDX2Q99626 313 aaPredicted RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 JPH2Q9BR39 696 aaPredicted RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 XPO4Q9C0E2 1151 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 AP5M1Q9H0R1 490 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 NUCKS1Q9H1E3 243 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 TUT1Q9H6E5 874 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 TYW1Q9NV66 732 aaKnown RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 PRKAG2Q9UGJ0 569 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 ZNF215Q9UL58 517 aaPredicted RBP8.24□□□□□ -1.09
SNX29-201ENST00000562510 WDR81Q562E7 1941 aa8.24□□□□□ -1.09
SNX29-201ENST00000562510 COL1A2P08123 1366 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 MYH9P35579 1960 aaKnown RBP8.23□□□□□ -1.09
SNX29-201ENST00000562510 CCDC169A6NNP5 214 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 H0YCG3 227 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 CDK2AP1O14519 115 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 SLC16A4O15374 487 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 SEPT4O43236 478 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 CALUO43852 315 aaPredicted RBP8.23□□□□□ -1.09
SNX29-201ENST00000562510 C22orf31O95567 290 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 F2P00734 622 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 ZNF286BP0CG31 522 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 SCP2P22307 547 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 GLRA2P23416 452 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 MSX1P28360 303 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 GJA9P57773 515 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 NKX3-2P78367 333 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 SMAD3P84022 425 aaKnown RBP8.23□□□□□ -1.09
SNX29-201ENST00000562510 DMP1Q13316 513 aaPredicted RBP8.23□□□□□ -1.09
SNX29-201ENST00000562510 NR1I3Q14994 352 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 PPP2R5AQ15172 486 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 KRT31Q15323 416 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 FSCN1Q16658 493 aaKnown RBP8.23□□□□□ -1.09
SNX29-201ENST00000562510 FILIP1Q7Z7B0 1213 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 KSR1Q8IVT5 923 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 FAM114A1Q8IWE2 563 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 ZSCAN1Q8NBB4 408 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 ANKRD20A12PQ8NF67 263 aa8.23□□□□□ -1.09
SNX29-201ENST00000562510 MAFAQ8NHW3 353 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms