RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 IGFBP4P22692 258 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 PPM1AP35813 382 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 GRIK3Q13003 919 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 FAM26FQ5R3K3 315 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 SLC39A4Q6P5W5 647 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 FMR1NBQ8N0W7 255 aaPredicted RBP18.29■□□□□ 0.52
CLK3-207ENST00000562389 ENGASEQ8NFI3 743 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 ACCSQ96QU6 501 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 TMEM175Q9BSA9 504 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 CCDC94Q9BW85 323 aaPredicted RBP18.29■□□□□ 0.52
CLK3-207ENST00000562389 HAPLN2Q9GZV7 340 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 LMAN2LQ9H0V9 348 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 MIOSQ9NXC5 875 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 PLAGL2Q9UPG8 496 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 GDAQ9Y2T3 454 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 MTCH2Q9Y6C9 303 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 EIF3DO15371 548 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLK3-207ENST00000562389 KLRC4O43908 158 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 DDHD2O94830 711 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 HARSP12081 509 aaKnown RBP18.28■□□□□ 0.52
CLK3-207ENST00000562389 MATR3P43243 847 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLK3-207ENST00000562389 BCAR1P56945 870 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 FAM160A1Q05DH4 1040 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 DSC1Q08554 894 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 SNW1Q13573 536 aaKnown RBP18.28■□□□□ 0.52
CLK3-207ENST00000562389 PTPROQ16827 1216 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 ZNF280BQ86YH2 543 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 THNSL1Q8IYQ7 743 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 SLC39A11Q8N1S5 342 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 MRPL38Q96DV4 380 aaKnown RBP18.28■□□□□ 0.52
CLK3-207ENST00000562389 CCDC34Q96HJ3 373 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 FAM193BQ96PV7 902 aaPredicted RBP18.28■□□□□ 0.52
CLK3-207ENST00000562389 TOPORSQ9NS56 1045 aaPredicted RBP18.28■□□□□ 0.52
CLK3-207ENST00000562389 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
CLK3-207ENST00000562389 UBE4BO95155 1302 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 PTGESO14684 152 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 GRM6O15303 877 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 B4GALT3O60512 393 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 FGF18O76093 207 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 GALTP07902 379 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 PBX3P40426 434 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 ALDH7A1P49419 539 aaKnown RBP18.27■□□□□ 0.52
CLK3-207ENST00000562389 YARSP54577 528 aaKnown RBP18.27■□□□□ 0.52
CLK3-207ENST00000562389 PLCB3Q01970 1234 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 UBE3AQ05086 875 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 KCNA1Q09470 495 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 KYAT1Q16773 422 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 SLFN12LQ6IEE8 588 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 KANK3Q6NY19 840 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 COLGALT2Q8IYK4 626 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 SPPL3Q8TCT6 385 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 HPS3Q969F9 1004 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 ACAP3Q96P50 834 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 GBP3Q9H0R5 595 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 TMEM206Q9H813 350 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 ALG13Q9NP73 1137 aaKnown RBP18.27■□□□□ 0.52
CLK3-207ENST00000562389 SPG21Q9NZD8 308 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 DNAJB4Q9UDY4 337 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 LZTS1Q9Y250 596 aa18.27■□□□□ 0.52
CLK3-207ENST00000562389 A0A0B4J269 797 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 ANKRD63C9JTQ0 380 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 OGTO15294 1046 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 FAM189A1O60320 539 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 PRPF6O94906 941 aaKnown RBP18.26■□□□□ 0.51
CLK3-207ENST00000562389 PRR29P0C7W0 189 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 SLC11A1P49279 550 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 OSTNP61366 133 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 DPYDQ12882 1025 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 XKR4Q5GH76 650 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 ALKAL1Q6UXT8 129 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 CLEC17AQ6ZS10 378 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 EPM2AIP1Q7L775 607 aaPredicted RBP18.26■□□□□ 0.51
CLK3-207ENST00000562389 GLIS3Q8NEA6 775 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 SNX27Q96L92 541 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 EXOC1Q9NV70 894 aa18.26■□□□□ 0.51
CLK3-207ENST00000562389 PRRC2BQ5JSZ5 2229 aaKnown RBP18.25■□□□□ 0.51
CLK3-207ENST00000562389 TISP43B9A030 160 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 GADD45BO75293 160 aaPredicted RBP18.25■□□□□ 0.51
CLK3-207ENST00000562389 THP07101 528 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 PSMD2Q13200 908 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 POSTNQ15063 836 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 KMT5BQ4FZB7 885 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 SYCP3Q8IZU3 236 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 MAFAQ8NHW3 353 aaPredicted RBP18.25■□□□□ 0.51
CLK3-207ENST00000562389 ZNF507Q8TCN5 953 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 POF1BQ8WVV4 589 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 TIGD1Q96MW7 591 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 MSTO1Q9BUK6 570 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 CXCL16Q9H2A7 254 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 IKZF4Q9H2S9 585 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 CNTN3Q9P232 1028 aa18.25■□□□□ 0.51
CLK3-207ENST00000562389 NT5C1B-RDH14C9J2C7 533 aa18.24■□□□□ 0.51
CLK3-207ENST00000562389 RPN1P04843 607 aaKnown RBP18.24■□□□□ 0.51
CLK3-207ENST00000562389 ALDH2P05091 517 aa18.24■□□□□ 0.51
CLK3-207ENST00000562389 CLTAP09496 248 aa18.24■□□□□ 0.51
CLK3-207ENST00000562389 DNAJB1P25685 340 aa18.24■□□□□ 0.51
CLK3-207ENST00000562389 ADSSP30520 456 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms