RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 NFIL3Q16649 462 aa24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 FNDC1Q4ZHG4 1894 aaPredicted RBP24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 ZC3H3Q8IXZ2 948 aaKnown RBP24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 MRFAP1L1Q96HT8 127 aa24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 IKZF4Q9H2S9 585 aa24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 TMEM134Q9H6X4 195 aa24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 C1orf112Q9NSG2 853 aa24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 IFNKQ9P0W0 207 aa24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 CGNQ9P2M7 1197 aaKnown RBP24.5■■□□□ 1.51
SYNGR3-202ENST00000562045 A0A1B0GUA9 196 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 LCHNA4D1U4 455 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 CETN3O15182 167 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 TPM3P06753 285 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 NR2F2P24468 414 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 ADAM9Q13443 819 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 PCBP1Q15365 356 aaKnown RBP eCLIP24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 EEF1DP3Q658K8 133 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 ECHDC2Q86YB7 292 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 EEF2KMTQ96G04 330 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 PDLIM2Q96JY6 352 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 CNOT6LQ96LI5 555 aaKnown RBP24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 PRIMPOLQ96LW4 560 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 PDZD7Q9H5P4 517 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 LIMA1Q9UHB6 759 aaKnown RBP24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 A0A0U1RQF3 1178 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 GNA14O95837 355 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 XPO4Q9C0E2 1151 aaKnown RBP24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 AGPAT3Q9NRZ7 376 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 FAM105AQ9NUU6 356 aa24.49■■□□□ 1.51
SYNGR3-202ENST00000562045 LRRC10BA6NIK2 292 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 NR3C1P04150 777 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 FGFR1P11362 822 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 AXLP30530 894 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 NOTUMQ6P988 496 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 SPRED2Q7Z698 418 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 FILIP1Q7Z7B0 1213 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 ZNF598Q86UK7 904 aaKnown RBP24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 CREBRFQ8IUR6 639 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 LPPQ93052 612 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 TARS2Q9BW92 718 aaKnown RBP24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 TRAIPQ9BWF2 469 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 RC3H2Q9HBD1 1191 aaKnown RBP24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 RNF19AQ9NV58 838 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 HES2Q9Y543 173 aa24.48■■□□□ 1.51
SYNGR3-202ENST00000562045 SMAD3P84022 425 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 STRN3Q13033 797 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 KRT31Q15323 416 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 NPAS4Q8IUM7 802 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 RNF169Q8NCN4 708 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 SMG8Q8ND04 991 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 ZBED2Q9BTP6 218 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 PCDHB2Q9Y5E7 798 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 TLL1O43897 1013 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 DGKIO75912 1065 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 HTRA4P83105 476 aaPredicted RBP24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 MYBPC2Q14324 1141 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 FILIP1LQ4L180 1135 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 APTXQ7Z2E3 356 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 PPP1R9BQ96SB3 815 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 ACO2Q99798 780 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 RNF39Q9H2S5 420 aa24.47■■□□□ 1.51
SYNGR3-202ENST00000562045 CLIC2O15247 247 aa24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 NPTXRO95502 500 aa24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 DNAJB2P25686 324 aa24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 CDC25BP30305 580 aa24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 ATF7IP2Q5U623 682 aa24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 TMEM174Q8WUU8 243 aa24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 ZBTB45Q96K62 511 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 NAP1L5Q96NT1 182 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 TMEM161AQ9NX61 479 aa24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 PCDHB7Q9Y5E2 793 aa24.46■■□□□ 1.51
SYNGR3-202ENST00000562045 A0A1B0GTH6 734 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 ABLIM1O14639 778 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 CA3P07451 260 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 TPM2P07951 284 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 NCBP1Q09161 790 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 SLC27A1Q6PCB7 646 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 SLC9A9Q8IVB4 645 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 C12orf56Q8IXR9 622 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 ZNF689Q96CS4 500 aaPredicted RBP24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 RAD9AQ99638 391 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 HAPLN2Q9GZV7 340 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 NKX2-4Q9H2Z4 354 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 NXF3Q9H4D5 531 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 PTPRHQ9HD43 1115 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 IPPQ9Y573 584 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 PCDHA11Q9Y5I1 949 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 KIAA1671Q9BY89 1806 aa24.45■■□□□ 1.5
SYNGR3-202ENST00000562045 TISP43B9A030 160 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 HNRNPDLO14979 420 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 SLC16A3O15427 465 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 MTIF2P46199 727 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 COPB1P53618 953 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 MARSP56192 900 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 TMEM132AQ24JP5 1023 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 CCDC40Q4G0X9 1142 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 CLLU1OSQ5K130 101 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 BICD1Q96G01 975 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 TUBGCP2Q9BSJ2 902 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms