RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 PSEN1P49768 467 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 RASA3Q14644 834 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 ABCB5Q2M3G0 1257 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 GALNTL6Q49A17 601 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 CKAP2Q8WWK9 683 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 CBWD1Q9BRT8 395 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 LXNQ9BS40 222 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 ZNF577Q9BSK1 485 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 A8MUI8 341 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 DDX39AO00148 427 aaKnown RBP14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 DIAPH2O60879 1101 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 NEBLO76041 1014 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 ITIH2P19823 946 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 MXI1P50539 228 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 SLC8A3P57103 927 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 EPC2Q52LR7 807 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 C12orf50Q8NA57 414 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 ATG4AQ8WYN0 398 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 SLC5A5Q92911 643 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 GMCL1Q96IK5 515 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 L3MBTL3Q96JM7 780 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 PLCD4Q9BRC7 762 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 UNC45AQ9H3U1 944 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 KCND2Q9NZV8 630 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 NOCTQ9UK39 431 aaKnown RBP14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 PCDHAC2Q9Y5I4 1007 aa14.95□□□□□ -0.02
VPS9D1-202ENST00000561976 TTC4O95801 387 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 CCND1P24385 295 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 FITM2Q8N6M3 262 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 GMCL1P1Q8NEA9 526 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 SNF8Q96H20 258 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 NKIRAS1Q9NYS0 192 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 KLHL14Q9P2G3 628 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 PRR12Q9ULL5 1215 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 TRIM33Q9UPN9 1127 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 O00370 1275 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 ITGA8P53708 1063 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 LACTBP83111 547 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 CRAMP1Q96RY5 1269 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 RXFP1Q9HBX9 757 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 CHST7Q9NS84 486 aa14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 LARSQ9P2J5 1176 aaKnown RBP14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 GREB1LQ9C091 1923 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 AHDC1Q5TGY3 1603 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-202ENST00000561976 PIK3CDO00329 1044 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 P4HA2O15460 535 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 GJB6O95452 261 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 CYP1A2P05177 515 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ADCY8P40145 1251 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 MSH2P43246 934 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 FMO1Q01740 532 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 MPP2Q14168 576 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 MYBPC2Q14324 1141 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 PADI6Q6TGC4 694 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 SEPT14Q6ZU15 432 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 KIAA0825Q8IV33 1275 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 SP8Q8IXZ3 490 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 SRRM1Q8IYB3 904 aaKnown RBP14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 FAM71AQ8IYT1 594 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 DAW1Q8N136 415 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 XXYLT1Q8NBI6 393 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ZSWIM2Q8NEG5 633 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 PAIP2Q9BPZ3 127 aaKnown RBP14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 WDR11Q9BZH6 1224 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 TRIM7Q9C029 511 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 TRIM6Q9C030 488 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 TMEM206Q9H813 350 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 PKD2L1Q9P0L9 805 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ANAPC5Q9UJX4 755 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 GTF3C4Q9UKN8 822 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 GOLGA8IPA6NC78 632 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 GOLGA8JA6NMD2 632 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 POLR2MP0CAP2 368 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ALADP13716 330 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ATF2P15336 505 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 MFAP3P55082 362 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ATP11AP98196 1134 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 TNIP1Q15025 636 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ZNF568Q3ZCX4 644 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 CCDC174Q6PII3 467 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ARHGEF18Q6ZSZ5 1173 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 RMDN2Q96LZ7 410 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 PWWP2AQ96N64 755 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 ACCSQ96QU6 501 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 HSPBP1Q9NZL4 362 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 UVRAGQ9P2Y5 699 aa14.93□□□□□ -0.02
VPS9D1-202ENST00000561976 FSCN2O14926 492 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 TP73O15350 636 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 GAS8O95995 478 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 GH2P01242 217 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 ARP10275 920 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 GYS1P13807 737 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 TBC1D10BQ4KMP7 808 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 CEP55Q53EZ4 464 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 KREMEN1Q96MU8 473 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 TEKT3Q9BXF9 490 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 TMEM117Q9H0C3 514 aa14.92□□□□□ -0.02
VPS9D1-202ENST00000561976 ARHGEF3Q9NR81 526 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms