RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 CHFRQ96EP1 664 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 NEU1Q99519 415 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 MLST8Q9BVC4 326 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 TEX101Q9BY14 249 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 ACE2Q9BYF1 805 aaPredicted RBP3.25□□□□□ -1.89
CHD9-204ENST00000561869 IKZF4Q9H2S9 585 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 NRDE2Q9H7Z3 1164 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 BCO1Q9HAY6 547 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 DKK2Q9UBU2 259 aa3.25□□□□□ -1.89
CHD9-204ENST00000561869 CXorf49A8MYA2 514 aaPredicted RBP3.24□□□□□ -1.89
CHD9-204ENST00000561869 PRR5-ARHGAP8B1AHC4 643 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 PJA2O43164 708 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 ITGB1P05556 798 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 OSMP13725 252 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 HSP90B1P14625 803 aaKnown RBP3.24□□□□□ -1.89
CHD9-204ENST00000561869 ALOX15P16050 662 aaPredicted RBP3.24□□□□□ -1.89
CHD9-204ENST00000561869 AGXTP21549 392 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 GUCY1A2P33402 732 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 SLC6A9P48067 706 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 TGFB2P61812 414 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 NHLH2Q02577 135 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 MALLQ13021 153 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 KLF1Q13351 362 aaPredicted RBP3.24□□□□□ -1.89
CHD9-204ENST00000561869 MUM1L1Q5H9M0 696 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 FAM102AQ5T9C2 384 aaPredicted RBP3.24□□□□□ -1.89
CHD9-204ENST00000561869 CNTD1Q8N815 330 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 RNF169Q8NCN4 708 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 OR10H5Q8NGA6 315 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 SLC2A13Q96QE2 648 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 SLC46A2Q9BY10 475 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 PUS7LQ9H0K6 701 aaKnown RBP3.24□□□□□ -1.89
CHD9-204ENST00000561869 SPC25Q9HBM1 224 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 SPON1Q9HCB6 807 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 RBM12Q9NTZ6 932 aaKnown RBP3.24□□□□□ -1.89
CHD9-204ENST00000561869 DNAJC28Q9NX36 388 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 SLC5A4Q9NY91 659 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 C11orf21Q9P2W6 132 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 CLCA2Q9UQC9 943 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 HDAC5Q9UQL6 1122 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 SIK3Q9Y2K2 1263 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 ATP8A1Q9Y2Q0 1164 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 REXO2Q9Y3B8 237 aaKnown RBP3.24□□□□□ -1.89
CHD9-204ENST00000561869 GPR45Q9Y5Y3 372 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 COL4A3Q01955 1670 aa3.24□□□□□ -1.89
CHD9-204ENST00000561869 CENPVL1A0A0U1RR11 272 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 TMEM200CA6NKL6 621 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 DRGXA6NNA5 263 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 ZNF185O15231 689 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 RECQL4O94761 1208 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 GSPT1P15170 499 aaKnown RBP3.23□□□□□ -1.89
CHD9-204ENST00000561869 ECHS1P30084 290 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 PTPN7P35236 360 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 PTGS2P35354 604 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 SLC5A3P53794 718 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 CLRN1P58418 232 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 RNASE9P60153 205 aaKnown RBP3.23□□□□□ -1.89
CHD9-204ENST00000561869 AMPD3Q01432 767 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 COL10A1Q03692 680 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 SP140Q13342 867 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 PDCD4Q53EL6 469 aaKnown RBP3.23□□□□□ -1.89
CHD9-204ENST00000561869 MBNL2Q5VZF2 373 aaKnown RBP3.23□□□□□ -1.89
CHD9-204ENST00000561869 EFCAB12Q6NXP0 572 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 PDZD4Q76G19 769 aaPredicted RBP3.23□□□□□ -1.89
CHD9-204ENST00000561869 GDF7Q7Z4P5 450 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 VRK3Q8IV63 474 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 FBXO18Q8NFZ0 1043 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 TFAP2CQ92754 450 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 MYEOVQ96EZ4 313 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 DCLRE1CQ96SD1 692 aaKnown RBP3.23□□□□□ -1.89
CHD9-204ENST00000561869 TRPM5Q9NZQ8 1165 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 SLC23A1Q9UHI7 598 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 EIF2B4Q9UI10 523 aaKnown RBP3.23□□□□□ -1.89
CHD9-204ENST00000561869 PCDHGA2Q9Y5H1 932 aa3.23□□□□□ -1.89
CHD9-204ENST00000561869 GRID2IPA4D2P6 1211 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 MARCH11A6NNE9 402 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 FZD9O00144 591 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 FOXN1O15353 648 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PCDHGA12O60330 932 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 LPXNO60711 386 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 NCR1O76036 304 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 AMY1AP04745 511 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 RBP3P10745 1247 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PROZP22891 400 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PCSK1P29120 753 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 IARSP41252 1262 aaKnown RBP3.22□□□□□ -1.89
CHD9-204ENST00000561869 WASP42768 502 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 CDKN1CP49918 316 aaPredicted RBP3.22□□□□□ -1.89
CHD9-204ENST00000561869 INHBCP55103 352 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 MGAT2Q10469 447 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 NOMO1Q15155 1222 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 BEAN1Q3B7T3 259 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 AGAP9Q5VTM2 703 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 AFMIDQ63HM1 303 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 LRRC55Q6ZSA7 311 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 NECAB2Q7Z6G3 386 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 PQLC1Q8N2U9 271 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD9-204ENST00000561869 ZFP28Q8NHY6 868 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 STON2Q8WXE9 905 aa3.22□□□□□ -1.89
CHD9-204ENST00000561869 CEP89Q96ST8 783 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms