RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 POTEEQ6S8J3 1075 aa19.88■□□□□ 0.77
RAB40C-206ENST00000561781 MIGA2Q7L4E1 593 aa19.88■□□□□ 0.77
RAB40C-206ENST00000561781 DAAM2Q86T65 1068 aa19.88■□□□□ 0.77
RAB40C-206ENST00000561781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.88■□□□□ 0.77
RAB40C-206ENST00000561781 ESR2Q92731 530 aa19.88■□□□□ 0.77
RAB40C-206ENST00000561781 GFM2Q969S9 779 aaKnown RBP19.88■□□□□ 0.77
RAB40C-206ENST00000561781 ZSCAN10Q96SZ4 725 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-206ENST00000561781 PITPNM3Q9BZ71 974 aa19.88■□□□□ 0.77
RAB40C-206ENST00000561781 CHKBQ9Y259 395 aa19.88■□□□□ 0.77
RAB40C-206ENST00000561781 UMODL1Q5DID0 1318 aa19.88■□□□□ 0.77
RAB40C-206ENST00000561781 PSMG1O95456 288 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 T-ENOLP0DO92 83 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 STX2P32856 288 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 GSTM4Q03013 218 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 KLHL30Q0D2K2 578 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 RAPGEF1Q13905 1077 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 AOC3Q16853 763 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 DNAAF5Q86Y56 855 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 PDCD7Q8N8D1 485 aaKnown RBP19.87■□□□□ 0.77
RAB40C-206ENST00000561781 FAM133AQ8N9E0 248 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 RASGRP4Q8TDF6 673 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 ARHGEF2Q92974 986 aaKnown RBP19.87■□□□□ 0.77
RAB40C-206ENST00000561781 EPB41L1Q9H4G0 881 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 SYNCQ9H7C4 482 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 FLT1P17948 1338 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 RPTORQ8N122 1335 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 FAM187AA6NFU0 413 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 A6NJR5 290 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 MINDY4BA8MYZ0 360 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 PDE8BO95263 885 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 COBLL1Q53SF7 1204 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 C10orf76Q5T2E6 689 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 SYDE2Q5VT97 1194 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 PHLDB3Q6NSJ2 640 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 UHMK1Q8TAS1 419 aaKnown RBP19.87■□□□□ 0.77
RAB40C-206ENST00000561781 RBM46Q8TBY0 533 aaKnown RBP19.87■□□□□ 0.77
RAB40C-206ENST00000561781 STMN2Q93045 179 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 ABHD8Q96I13 439 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 MAGEF1Q9HAY2 307 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 TUBA8Q9NY65 449 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-206ENST00000561781 JAG2Q9Y219 1238 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 COL4A5P29400 1685 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 A0A1B0GUL6 1792 aa19.87■□□□□ 0.77
RAB40C-206ENST00000561781 TBX10O75333 385 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 PLTPP55058 493 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 DR1Q01658 176 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 CDR2Q01850 454 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 VSTM1Q6UX27 236 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 ERMNQ8TAM6 284 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 DIS3LQ8TF46 1054 aaKnown RBP19.86■□□□□ 0.77
RAB40C-206ENST00000561781 SNRNP27Q8WVK2 155 aaKnown RBP19.86■□□□□ 0.77
RAB40C-206ENST00000561781 DYDC2Q96IM9 177 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 SIKE1Q9BRV8 207 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 LSM14BQ9BX40 385 aaKnown RBP19.86■□□□□ 0.77
RAB40C-206ENST00000561781 TIMMDC1Q9NPL8 285 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 BTBD7Q9P203 1132 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 MTRF1LQ9UGC7 380 aaKnown RBP19.86■□□□□ 0.77
RAB40C-206ENST00000561781 R3HDM2Q9Y2K5 976 aaKnown RBP19.86■□□□□ 0.77
RAB40C-206ENST00000561781 STARD13Q9Y3M8 1113 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 WDR46O15213 610 aaKnown RBP19.86■□□□□ 0.77
RAB40C-206ENST00000561781 FGFR1OPO95684 399 aaKnown RBP19.86■□□□□ 0.77
RAB40C-206ENST00000561781 GYG1P46976 350 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 INF2Q27J81 1249 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 ZNF449Q6P9G9 518 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 ARHGEF18Q6ZSZ5 1173 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 CABP7Q86V35 215 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 CCDC65Q8IXS2 484 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 ANKRD42Q8N9B4 389 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 GDAP1Q8TB36 358 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 TEKT1Q969V4 418 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 SEMA4AQ9H3S1 761 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 KCNK9Q9NPC2 374 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 METTL5Q9NRN9 209 aaKnown RBP19.86■□□□□ 0.77
RAB40C-206ENST00000561781 INIPQ9NRY2 104 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 KRT82Q9NSB4 513 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 GGA1Q9UJY5 639 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 LTBP1Q14766 1721 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 ZNF804BA4D1E1 1349 aa19.86■□□□□ 0.77
RAB40C-206ENST00000561781 KRT36O76013 467 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 MTTPP55157 894 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 PTENP60484 403 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 DOK7Q18PE1 504 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 LRRC55Q6ZSA7 311 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 FAM47EQ6ZV65 393 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 PEX26Q7Z412 305 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 RUNDC3BQ96NL0 473 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 TTC7AQ9ULT0 858 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-206ENST00000561781 NR2E1Q9Y466 385 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 MROH5Q6ZUA9 1318 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 RIPK2O43353 540 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 PORP16435 677 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-206ENST00000561781 SERPINB8P50452 374 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 GRAMD4Q6IC98 578 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 BLIDQ8IZY5 108 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 NT5C3AQ9H0P0 336 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 PARP2Q9UGN5 583 aa19.85■□□□□ 0.77
RAB40C-206ENST00000561781 DDX3XO00571 662 aaKnown RBP eCLIP19.84■□□□□ 0.77
RAB40C-206ENST00000561781 GNAT2P19087 354 aa19.84■□□□□ 0.77
RAB40C-206ENST00000561781 DSG1Q02413 1049 aa19.84■□□□□ 0.77
RAB40C-206ENST00000561781 STRN3Q13033 797 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms