RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 WHAMMP3Q1A5X7 153 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 ZBTB41Q5SVQ8 909 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 GPD1LQ8N335 351 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 LINC01465Q8N7H1 131 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 HELQQ8TDG4 1101 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 PRPF31Q8WWY3 499 aaKnown RBP11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 PSPC1Q8WXF1 523 aaKnown RBP11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 SLC7A3Q8WY07 619 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 MIEF2Q96C03 454 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 FAM167AQ96KS9 214 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 SPATA33Q96N06 139 aa11.05□□□□□ -0.64
TUBGCP4-202ENST00000561691 A0A0B4J269 797 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 H0YCG3 227 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 HNRNPDLO14979 420 aaKnown RBP11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 EXTL3O43909 919 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 MSCO60682 206 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 SRGAP2O75044 1071 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 RFX1P22670 979 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 MARK3P27448 753 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 GPC3P51654 580 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 NLRP11P59045 1033 aaKnown RBP11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 WDR78Q5VTH9 848 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 GPR142Q7Z601 462 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 PALB2Q86YC2 1186 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 RNF10Q8N5U6 811 aaKnown RBP11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 TAS1R2Q8TE23 839 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 SCFD2Q8WU76 684 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 TRAPPC12Q8WVT3 735 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 POMGNT1Q8WZA1 660 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 EMID1Q96A84 441 aaPredicted RBP11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 ZBTB10Q96DT7 871 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 TLR10Q9BXR5 811 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 PLEKHA4Q9H4M7 779 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 TMEM8AQ9HCN3 771 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 MCM8Q9UJA3 840 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 PCDHGC5Q9Y5F6 944 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 ZNF236Q9UL36 1845 aa11.04□□□□□ -0.64
TUBGCP4-202ENST00000561691 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 SHOX2O60902 331 aaPredicted RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ERLIN1O75477 346 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 HOXD8P13378 290 aaPredicted RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 CALRP27797 417 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 GTF2H1P32780 548 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ABCD1P33897 745 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 LIG3P49916 1009 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 CCNA1P78396 465 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 TTLL4Q14679 1199 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 PSMD6Q15008 389 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 FBXW10Q5XX13 1052 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 SCARA3Q6AZY7 606 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 SV2AQ7L0J3 742 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 TRIM58Q8NG06 486 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 FAM213AQ9BRX8 229 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 FAM204AQ9H8W3 233 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 VTA1Q9NP79 307 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 PUF60Q9UHX1 559 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 CNTNAP2Q9UHC6 1331 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 LRRIQ4A6NIV6 560 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ZNF185O15231 689 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ADCY6O43306 1168 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 STRNO43815 780 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 C22orf31O95567 290 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 CHRNB2P17787 502 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ELF1P32519 619 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 AARSP49588 968 aaKnown RBP eCLIP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 CHMP4BP1P59074 171 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 PRPF4BQ13523 1007 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 FAM110CQ1W6H9 321 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 IER5Q5VY09 327 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 KRT39Q6A163 491 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ZNF572Q7Z3I7 529 aaPredicted RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 CREG2Q8IUH2 290 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 FAM71AQ8IYT1 594 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 LRRC71Q8N4P6 559 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 C2orf69Q8N8R5 385 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 LRRC57Q8N9N7 239 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 NOA1Q8NC60 698 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 NPLOC4Q8TAT6 608 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 SHC3Q92529 594 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ELMO3Q96BJ8 720 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 PNKPQ96T60 521 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 MMS19Q96T76 1030 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 AZI2Q9H6S1 392 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 ABCB6Q9NP58 842 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 UBE2TQ9NPD8 197 aaPredicted RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 NOCTQ9UK39 431 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 SNX12Q9UMY4 172 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 SAR1BQ9Y6B6 198 aa11.03□□□□□ -0.64
TUBGCP4-202ENST00000561691 GRID2IPA4D2P6 1211 aa11.02□□□□□ -0.65
TUBGCP4-202ENST00000561691 KLHL33A6NCF5 533 aa11.02□□□□□ -0.65
TUBGCP4-202ENST00000561691 IGF2BP3O00425 579 aaKnown RBP eCLIP11.02□□□□□ -0.65
TUBGCP4-202ENST00000561691 NCK2O43639 380 aa11.02□□□□□ -0.65
TUBGCP4-202ENST00000561691 BUB1O43683 1085 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms