RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 HSP90AA2PQ14568 343 aaPredicted RBP13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 RTP2Q5QGT7 225 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 GET4Q7L5D6 327 aaPredicted RBP13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 CDR2LQ86X02 465 aaPredicted RBP13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 GPR152Q8TDT2 470 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 ARHGEF3Q9NR81 526 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 KLK14Q9P0G3 267 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 CA14Q9ULX7 337 aa13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 SF3B1O75533 1304 aaKnown RBP eCLIP13.11□□□□□ -0.31
CARMIL3-204ENST00000561354 HNRNPA1P09651 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 RPL17P18621 184 aaKnown RBP13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 TXKP42681 527 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 ID4P47928 161 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 FAM187BQ17R55 369 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 PRSS55Q6UWB4 352 aaPredicted RBP13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 PIK3R5Q8WYR1 880 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 RABGGTAQ92696 567 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 MTMR9Q96QG7 549 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 PAAF1Q9BRP4 392 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 FZD8Q9H461 694 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 DLGAP2Q9P1A6 1054 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 FBXW11Q9UKB1 542 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 SIT1Q9Y3P8 196 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 NUMBLQ9Y6R0 609 aa13.1□□□□□ -0.31
CARMIL3-204ENST00000561354 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 NEMFO60524 1076 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 USO1O60763 962 aaKnown RBP13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 DTNBO60941 627 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 FSHRP23945 695 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 HOXA9P31269 272 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 STARD6P59095 220 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 ELAVL2Q12926 359 aaKnown RBP13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 CDCA2Q69YH5 1023 aaPredicted RBP13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 PDXDC1Q6P996 788 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 DCLRE1AQ6PJP8 1040 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 MCPH1Q8NEM0 835 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 LNX1Q8TBB1 728 aaPredicted RBP13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 SHDQ96IW2 340 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 CLSTN3Q9BQT9 956 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 TTPALQ9BTX7 342 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 GPRC5CQ9NQ84 441 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 CDH7Q9ULB5 785 aa13.09□□□□□ -0.31
CARMIL3-204ENST00000561354 MYO15AQ9UKN7 3530 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 A0A087WWV3 80 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 CASTOR2A6NHX0 329 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 BTBD18B2RXH4 712 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 PTGESO14684 152 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 THP07101 528 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 ANAPC15P60006 121 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 NAB2Q15742 525 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 PSMD5Q16401 504 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 LIN9Q5TKA1 542 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 ZBTB8OSQ8IWT0 167 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 KCNG4Q8TDN1 519 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 C2orf40Q9H1Z8 148 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 TUFT1Q9NNX1 390 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
CARMIL3-204ENST00000561354 POTEMA6NI47 508 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 WNT7AO00755 349 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 N4BP3O15049 544 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 KIF4AO95239 1232 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 C8AP07357 584 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 DCNP07585 359 aaKnown RBP13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 POU2F2P09086 479 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 ATP2B1P20020 1258 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 GPC5P78333 572 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 RAB33AQ14088 237 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 MAPK6Q16659 721 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 UVSSAQ2YD98 709 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 SPECC1Q5M775 1068 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 PPM1LQ5SGD2 360 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 ZC3H14Q6PJT7 736 aaKnown RBP13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 PARM1Q6UWI2 310 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 MTSS1LQ765P7 747 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 RTL10Q7L3V2 364 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 MAEAQ7L5Y9 396 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 CATSPER3Q86XQ3 398 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 CEP57Q86XR8 500 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 C1orf210Q8IVY1 113 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 DIS3L2Q8IYB7 885 aaKnown RBP13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 PJA1Q8NG27 643 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 HASPINQ8TF76 798 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 FGF13Q92913 245 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 FGF14Q92915 247 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 GTF3C6Q969F1 213 aa13.07□□□□□ -0.32
CARMIL3-204ENST00000561354 NACC1Q96RE7 527 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms